Factsheet for TraesCS6B01G368700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G338000.1	Wheat	nucleus	88.48	90.78
TraesCS6D01G318800.1	Wheat	nucleus	88.2	90.23
HORVU6Hr1G081650.1	Barley	cytosol, nucleus, plastid	86.24	80.58
Zm00001d046305_P001	Maize	nucleus, plastid	65.45	65.63
EER88499	Sorghum	nucleus, plastid	65.17	65.17
Os02t0233200-00	Rice	nucleus	61.8	62.68
GSMUA_Achr10P...	Banana	nucleus	49.16	62.28
TraesCS7B01G272900.1	Wheat	nucleus	62.64	62.12
GSMUA_Achr2P15550_001	Banana	mitochondrion, nucleus	49.44	57.52
KRH27373	Soybean	nucleus	53.65	57.19
GSMUA_Achr8P27730_001	Banana	nucleus	43.82	56.93
Solyc07g062260.2.1	Tomato	nucleus	50.28	56.83
PGSC0003DMT400018282	Potato	nucleus	50.28	56.83
KRH21913	Soybean	nucleus	51.69	56.62
Bra008378.1-P	Field mustard	nucleus	46.35	56.51
CDY14593	Canola	nucleus	46.35	56.31
KRH21914	Soybean	nucleus	52.81	56.29
KRH27375	Soybean	nucleus	50.84	56.21
GSMUA_Achr4P31020_001	Banana	nucleus	40.73	55.98
CDY26877	Canola	nucleus	46.07	55.97
AT1G78700.1	Thale cress	nucleus	50.56	55.38
CDX88466	Canola	nucleus	46.91	54.4
CDX87440	Canola	nucleus	46.63	54.07
Bra035060.1-P	Field mustard	nucleus	46.35	53.75
TraesCS3B01G156600.1	Wheat	nucleus	53.37	53.67
GSMUA_Achr9P05670_001	Banana	nucleus	45.22	52.96
CDY66394	Canola	plastid	18.26	46.76
TraesCS2B01G219300.1	Wheat	nucleus	37.64	42.81
Bra020986.1-P	Field mustard	cytosol	17.98	42.11
TraesCS3B01G142600.1	Wheat	nucleus	15.17	29.67

Protein Annotations

EnsemblPlants:TraesCS6B01G368700.1	EnsemblPlantsGene:TraesCS6B01G368700	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	InterPro:BES1_N	InterPro:BZR	PANTHER:PTHR31506	PANTHER:PTHR31506:SF2
PFAM:PF05687	SEG:seg	MapMan:11.3.2.4	MapMan:15.5.39	:	:

Description

No Description!

Coordinates

chr6B:+:642915733..642918649

Molecular Weight (calculated)

37719.5 Da

IEP (calculated)

8.823

GRAVY (calculated)

-0.609

Length

356 amino acids

Sequence
(BLAST)

001: MASRVPTWRE RENNRRRERR RRAVAANIFH GLRARGGYAL PKHCDNNEVL KALCDEAGWT VEPDGTTYRK GCKPPAAAEG ANPVVRSGSR SPCSSHPVSP
101: RAPYNPRAGP STFPTSGTSS HTTLGGGSSY YEGSSFIPWL KNLSSGSGFA SSSKFPRYSP HSYDYFSGGS ISAPVTPPSG SPRRMPHLNT GWGEYPSVQV
201: QPPWFSAGGS AYDDYASLPN STPSSPRGGH GVGPDPAWLS GFQISSAGPS SPTYSLMAPS NPFRVSGEMA AATASSSRMR TPCQSGTCSP VALAAHGDVQ
301: MEHREADDFA FGSGGRPVLV NAWEGERIHE VCASDEHELD LTLGLGSSKT RAGAVN

Best Arabidopsis Sequence Match ( AT1G78700.1 )
(BLAST)

001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR

Arabidopsis Description

BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.