Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 6
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035060.1-P Field mustard nucleus 97.84 44.3
CDX88466 Canola nucleus 97.84 44.3
CDX87440 Canola nucleus 97.84 44.3
CDY26877 Canola nucleus 87.05 41.3
CDY14593 Canola nucleus 87.05 41.3
AT1G78700.1 Thale cress nucleus 87.05 37.23
KRH21913 Soybean nucleus 66.19 28.31
KRH27375 Soybean nucleus 63.31 27.33
CDY37261 Canola mitochondrion 20.14 26.17
GSMUA_Achr10P... Banana nucleus 51.8 25.62
CDX98592 Canola nucleus 50.36 25.36
CDY01563 Canola nucleus 50.36 25.36
PGSC0003DMT400018282 Potato nucleus 56.12 24.76
Solyc07g062260.2.1 Tomato nucleus 55.4 24.44
CDX78903 Canola nucleus 48.2 24.28
KRH27373 Soybean nucleus 56.12 23.35
KRH21914 Soybean nucleus 55.4 23.05
TraesCS3B01G156600.1 Wheat nucleus 58.27 22.88
TraesCS3A01G139000.1 Wheat nucleus 58.27 22.75
TraesCS3D01G139300.1 Wheat nucleus 58.27 22.63
EES00101 Sorghum nucleus 54.68 21.84
Os01t0203000-01 Rice nucleus 56.83 21.64
Zm00001d039439_P001 Maize nucleus 53.24 21.45
TraesCS7D01G368000.1 Wheat nucleus 55.4 21.45
CDX99414 Canola nucleus 47.48 21.43
GSMUA_Achr2P15550_001 Banana mitochondrion, nucleus 46.76 21.24
TraesCS7B01G272900.1 Wheat nucleus 54.68 21.17
TraesCS7A01G354800.1 Wheat nucleus 54.68 21.17
EER88499 Sorghum nucleus, plastid 53.24 20.79
Zm00001d046305_P001 Maize nucleus, plastid 52.52 20.56
Os06t0552300-01 Rice nucleus 51.8 20.28
GSMUA_Achr4P31020_001 Banana nucleus 36.69 19.69
Os02t0233200-00 Rice nucleus 48.92 19.37
HORVU7Hr1G088980.1 Barley cytosol, nucleus 53.24 18.83
TraesCS6A01G338000.1 Wheat nucleus 46.76 18.73
HORVU6Hr1G081650.1 Barley cytosol, nucleus, plastid 50.36 18.37
HORVU3Hr1G026420.2 Barley plastid 57.55 18.31
TraesCS6B01G368700.1 Wheat nucleus 46.76 18.26
GSMUA_Achr8P27730_001 Banana nucleus 35.97 18.25
TraesCS6D01G318800.1 Wheat nucleus 45.32 18.1
GSMUA_Achr9P05670_001 Banana nucleus 37.41 17.11
CDX73140 Canola nucleus 27.34 14.79
CDX69246 Canola nucleus 30.22 13.86
CDX75598 Canola nucleus 30.22 13.86
CDX72603 Canola nucleus 30.22 13.77
CDX96665 Canola plastid 32.37 13.51
CDX83768 Canola plastid 32.37 13.35
CDX90690 Canola nucleus 27.34 13.33
CDY64371 Canola nucleus 27.34 13.33
CDY69925 Canola nucleus, plastid 27.34 13.29
CDY62653 Canola nucleus 29.5 13.27
CDY26676 Canola nucleus, plastid 30.94 13.03
CDY50574 Canola nucleus, plastid 30.94 12.99
CDX81925 Canola nucleus 28.78 12.42
CDX68150 Canola nucleus 29.5 12.39
CDY59466 Canola nucleus 29.5 12.31
CDY21670 Canola nucleus 28.78 10.36
Protein Annotations
MapMan:15.5.39UniProt:A0A078JI73InterPro:BZREnsemblPlants:CDY66394ProteinID:CDY66394ProteinID:CDY66394.1
GO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009742
GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00053520001PANTHER:PTHR31506PANTHER:PTHR31506:SF10UniParc:UPI0004EEB367SEG:seg
Description
BnaC03g78350DBnaC03g78350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI73]
Coordinates
chrLK035236:+:16509..16928
Molecular Weight (calculated)
14655.8 Da
IEP (calculated)
4.181
GRAVY (calculated)
-0.409
Length
139 amino acids
Sequence
(BLAST)
001: MNQINNSFFV SSTPPSPTRQ QTVPDSEWFA GIQLAQSVPA SPTFSLVSRN PFGFREDQLA SAGGGGGSRM WTLGQSGTCS PAITQTGDVP MSEAVAPPEF
101: AFGSNANGLV KAWEGERIHE ESGSDDLELT LGNSSTRCN
Best Arabidopsis Sequence Match ( AT1G78700.1 )
(BLAST)
001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR
Arabidopsis Description
BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.