CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G75080.2	Thale cress	nucleus	63.55	20.24
CDY66394	Canola	plastid	26.17	20.14
CDX68150	Canola	nucleus	60.75	19.64
CDY59466	Canola	nucleus	60.75	19.52
CDX73140	Canola	nucleus	46.73	19.46
CDY69925	Canola	nucleus, plastid	51.4	19.23
CDY26676	Canola	nucleus, plastid	56.07	18.18
CDY50574	Canola	nucleus, plastid	56.07	18.13
CDX96665	Canola	plastid	56.07	18.02
CDX83768	Canola	plastid	55.14	17.51
CDX81925	Canola	nucleus	49.53	16.46
GSMUA_Achr2P06600_001	Banana	nucleus	35.51	14.18
GSMUA_Achr7P26010_001	Banana	nucleus	37.38	13.89
CDX69246	Canola	nucleus	39.25	13.86
CDX75598	Canola	nucleus	39.25	13.86
PGSC0003DMT400071585	Potato	cytosol, nucleus, peroxisome	35.51	13.77
PGSC0003DMT400039879	Potato	nucleus, plastid	42.06	13.64
CDY62653	Canola	nucleus	39.25	13.59
Solyc12g089040.1.1	Tomato	nucleus	42.06	13.51
KRH15250	Soybean	nucleus	39.25	13.5
KRH51888	Soybean	nucleus	40.19	13.44
Os07t0580500-01	Rice	nucleus	37.38	13.42
GSMUA_Achr3P29980_001	Banana	nucleus	37.38	13.38
VIT_18s0001g12020.t01	Wine grape	nucleus	38.32	13.36
GSMUA_Achr8P31150_001	Banana	nucleus	36.45	13.22
Solyc04g079980.2.1	Tomato	nucleus	40.19	13.15
KRH61201	Soybean	nucleus	39.25	13.12
CDX72603	Canola	nucleus	37.38	13.11
CDX78903	Canola	nucleus	33.64	13.04
CDY64371	Canola	nucleus	34.58	12.98
CDX90690	Canola	nucleus	34.58	12.98
CDY21670	Canola	nucleus	46.73	12.95
KRH05791	Soybean	nucleus	37.38	12.86
CDY01563	Canola	nucleus	32.71	12.68
CDX98592	Canola	nucleus	32.71	12.68
EER99604	Sorghum	nucleus, plastid	39.25	12.5
CDY14593	Canola	nucleus	33.64	12.29
CDY26877	Canola	nucleus	32.71	11.95
TraesCS2A01G187800.1	Wheat	nucleus	34.58	11.82
TraesCS2B01G219300.1	Wheat	nucleus	34.58	11.82
TraesCS2D01G199900.1	Wheat	nucleus	34.58	11.82
Zm00001d006677_P001	Maize	nucleus	35.51	11.73
CDX99414	Canola	nucleus	33.64	11.69
Zm00001d021927_P001	Maize	nucleus	34.58	11.67
CDX87440	Canola	nucleus	31.78	11.07
CDX88466	Canola	nucleus	31.78	11.07
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	10.28	3.93

Protein Annotations

MapMan:15.5.39	UniProt:A0A078HHP1	InterPro:BZR	EnsemblPlants:CDY37261	ProteinID:CDY37261	ProteinID:CDY37261.1
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009742
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00063763001	PANTHER:PTHR31506	PANTHER:PTHR31506:SF6	UniParc:UPI0004EDE17C	SEG:seg

Description

BnaCnng08150DBnaCnng08150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHP1]

Coordinates

chrLK032396:-:161271..161937

Molecular Weight (calculated)

12032.6 Da

IEP (calculated)

10.976

GRAVY (calculated)

-0.459

Length

107 amino acids

Sequence
(BLAST)

001: MVHRLETLLT HLKTRALFLR RFRKFAQQQK QPFSGSMVPA SPTFNLMKPS LPLGMSPNVA AAFQGFGQGS EFKFENSQVK PWEGERIHDV GMEDLELTLG
101: NGKKARG

Best Arabidopsis Sequence Match ( AT1G75080.1 )
(BLAST)

001: MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG

Arabidopsis Description

BZR1Protein BRASSINAZOLE-RESISTANT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S307]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.