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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50574 Canola nucleus, plastid 87.58 85.2
CDY26676 Canola nucleus, plastid 86.65 84.55
CDX96665 Canola plastid 86.02 83.18
CDX83768 Canola plastid 86.34 82.49
AT1G19350.3 Thale cress nucleus 86.65 78.15
CDY21670 Canola nucleus 93.48 77.98
CDY69925 Canola nucleus, plastid 66.77 75.17
CDX68150 Canola nucleus 77.02 74.92
CDX73140 Canola nucleus 59.32 74.32
CDY59466 Canola nucleus 76.71 74.17
KRH15250 Soybean nucleus 61.49 63.67
KRH05791 Soybean nucleus 60.87 63.02
KRH51888 Soybean nucleus 62.42 62.81
KRH61201 Soybean nucleus 60.87 61.25
PGSC0003DMT400071585 Potato cytosol, nucleus, peroxisome 51.86 60.51
PGSC0003DMT400039879 Potato nucleus, plastid 60.56 59.09
VIT_18s0001g12020.t01 Wine grape nucleus 55.9 58.63
Solyc12g089040.1.1 Tomato nucleus 60.56 58.56
Os07t0580500-01 Rice nucleus 54.04 58.39
Solyc04g079980.2.1 Tomato nucleus 59.01 58.1
GSMUA_Achr7P26010_001 Banana nucleus 51.55 57.64
GSMUA_Achr2P06600_001 Banana nucleus 46.58 55.97
CDY64371 Canola nucleus 49.38 55.79
CDX90690 Canola nucleus 48.76 55.09
TraesCS2D01G199900.1 Wheat nucleus 53.42 54.95
TraesCS2B01G219300.1 Wheat nucleus 53.11 54.63
TraesCS2A01G187800.1 Wheat nucleus 53.11 54.63
GSMUA_Achr3P29980_001 Banana nucleus 50.62 54.52
CDX69246 Canola nucleus 50.31 53.47
GSMUA_Achr8P31150_001 Banana nucleus 48.76 53.22
CDX75598 Canola nucleus 49.69 52.81
CDX72603 Canola nucleus 49.69 52.46
EER99604 Sorghum nucleus, plastid 54.04 51.79
CDY62653 Canola nucleus 49.69 51.78
Zm00001d021927_P001 Maize nucleus 50.31 51.1
Zm00001d006677_P001 Maize nucleus 50.93 50.62
CDY37261 Canola mitochondrion 16.46 49.53
CDX78903 Canola nucleus 40.99 47.83
CDY01563 Canola nucleus 40.06 46.74
CDX98592 Canola nucleus 39.75 46.38
HORVU0Hr1G040070.2 Barley cytosol, mitochondrion 38.82 44.64
CDY14593 Canola nucleus 39.44 43.34
CDX99414 Canola nucleus 40.68 42.53
CDY26877 Canola nucleus 38.51 42.32
CDX88466 Canola nucleus 39.13 41.04
CDX87440 Canola nucleus 39.13 41.04
CDY66394 Canola plastid 12.42 28.78
Protein Annotations
MapMan:11.3.2.4MapMan:15.5.39InterPro:BES1_NInterPro:BZREnsemblPlants:CDX81925ProteinID:CDX81925
ProteinID:CDX81925.1GO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006351GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009719GO:GO:0009742
GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00136887001PFAM:PF05687PANTHER:PTHR31506PANTHER:PTHR31506:SF6UniParc:UPI0004EE15DD
SEG:seg:::::
Description
BnaC08g36760D
Coordinates
chrLK031826:+:1511203..1512630
Molecular Weight (calculated)
35309.0 Da
IEP (calculated)
9.909
GRAVY (calculated)
-0.755
Length
322 amino acids
Sequence
(BLAST)
001: MTSEGAMLTS AASMATRRKP SWRERENNRR RERKRRAVAA KIYNGLRVQG NFNLPRHCDN NEVLKALCSE AGWVVEEDGT TYRKGHKPLP DDMAGSSSRA
101: TPYSSYNQSP FESPILSYQV SPSSSAFPSP SRSGDTHNIS TIFPFLRNGG INPSSLPPLR ISNSAPVTPP VSSPPSRNPK PLPTWESLTK QTMANAARQS
201: VSSFNYPFYA VSAPTSPTHH RQFNAPATIP ECNESDSSTI DSGHWISFQK FSQQPFHGGS SVSPSPTFNL VKPPLPQQLS PNTSAAQEIG QNSQVKPWEG
301: ERIHDVAMED LELTLGNSKG RS
Best Arabidopsis Sequence Match ( AT1G19350.1 )
(BLAST)
001: MTSDGATSTS AAAAAAAMAT RRKPSWRERE NNRRRERRRR AVAAKIYTGL RAQGNYNLPK HCDNNEVLKA LCSEAGWVVE EDGTTYRKGH KPLPGDMAGS
101: SSRATPYSSH NQSPLSSTFD SPILSYQVSP SSSSFPSPSR VGDPHNISTI FPFLRNGGIP SSLPPLRISN SAPVTPPVSS PTSRNPKPLP TWESFTKQSM
201: SMAAKQSMTS LNYPFYAVSA PASPTHHRQF HAPATIPECD ESDSSTVDSG HWISFQKFAQ QQPFSASMVP TSPTFNLVKP APQQLSPNTA AIQEIGQSSE
301: FKFENSQVKP WEGERIHDVA MEDLELTLGN GKAHS
Arabidopsis Description
BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.