Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012891.1-P | Field mustard | nucleus | 99.3 | 99.3 |
| CDX90690 | Canola | nucleus | 98.95 | 98.95 |
| AT3G50750.1 | Thale cress | nucleus | 87.72 | 90.58 |
| KRH76864 | Soybean | nucleus | 66.32 | 61.36 |
| GSMUA_Achr7P26010_001 | Banana | nucleus | 61.05 | 60.42 |
| KRH28616 | Soybean | nucleus | 65.26 | 60.0 |
| VIT_04s0023g01250.t01 | Wine grape | nucleus | 64.91 | 58.54 |
| CDX73140 | Canola | nucleus | 52.63 | 58.37 |
| CDX69246 | Canola | nucleus | 61.75 | 58.09 |
| CDX75598 | Canola | nucleus | 61.75 | 58.09 |
| GSMUA_Achr2P06600_001 | Banana | nucleus | 53.68 | 57.09 |
| Solyc02g063010.2.1 | Tomato | nucleus | 63.86 | 57.05 |
| CDX72603 | Canola | nucleus | 61.05 | 57.05 |
| Os07t0580500-01 | Rice | nucleus | 59.65 | 57.05 |
| CDY62653 | Canola | nucleus | 61.75 | 56.96 |
| PGSC0003DMT400011470 | Potato | nucleus | 63.51 | 56.74 |
| CDY69925 | Canola | nucleus, plastid | 56.84 | 56.64 |
| GSMUA_Achr3P29980_001 | Banana | nucleus | 59.3 | 56.52 |
| GSMUA_Achr8P31150_001 | Banana | nucleus | 56.84 | 54.92 |
| Zm00001d021927_P001 | Maize | nucleus | 60.0 | 53.94 |
| TraesCS2B01G219300.1 | Wheat | nucleus | 58.95 | 53.67 |
| TraesCS2A01G187800.1 | Wheat | nucleus | 58.95 | 53.67 |
| TraesCS2D01G199900.1 | Wheat | nucleus | 58.25 | 53.04 |
| CDX68150 | Canola | nucleus | 60.7 | 52.27 |
| CDY59466 | Canola | nucleus | 60.7 | 51.95 |
| CDY26676 | Canola | nucleus, plastid | 59.3 | 51.21 |
| EER99604 | Sorghum | nucleus, plastid | 60.35 | 51.19 |
| Zm00001d006677_P001 | Maize | nucleus | 57.89 | 50.93 |
| CDY50574 | Canola | nucleus, plastid | 58.6 | 50.45 |
| CDX96665 | Canola | plastid | 58.95 | 50.45 |
| CDX83768 | Canola | plastid | 58.95 | 49.85 |
| CDX81925 | Canola | nucleus | 55.79 | 49.38 |
| CDX78903 | Canola | nucleus | 45.61 | 47.1 |
| CDY01563 | Canola | nucleus | 45.26 | 46.74 |
| CDX98592 | Canola | nucleus | 45.26 | 46.74 |
| HORVU0Hr1G040070.2 | Barley | cytosol, mitochondrion | 45.61 | 46.43 |
| CDY14593 | Canola | nucleus | 46.67 | 45.39 |
| CDY26877 | Canola | nucleus | 46.32 | 45.05 |
| CDX88466 | Canola | nucleus | 46.32 | 43.0 |
| CDX87440 | Canola | nucleus | 45.96 | 42.67 |
| CDY21670 | Canola | nucleus | 57.54 | 42.49 |
| CDX99414 | Canola | nucleus | 45.61 | 42.21 |
| CDY37261 | Canola | mitochondrion | 12.98 | 34.58 |
| CDY66394 | Canola | plastid | 13.33 | 27.34 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | UniProt:A0A078JA89 | InterPro:BES1_N | InterPro:BZR | EnsemblPlants:CDY64371 |
| ProteinID:CDY64371 | ProteinID:CDY64371.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00041155001 | PFAM:PF05687 | PANTHER:PTHR31506 |
| PANTHER:PTHR31506:SF6 | UniParc:UPI0004EDE03F | SEG:seg | : | : | : |
Description
BnaC07g50000DBnaC07g50000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JA89]
Coordinates
chrLK034450:+:27833..29155
Molecular Weight (calculated)
30690.8 Da
IEP (calculated)
9.633
GRAVY (calculated)
-0.640
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MTASGGGSTA AGGAGATGRM PTWKERENNK KRERRRRAIA AKIFTGLRSQ GNYNLPKHCD NNEVLKALCV EAGWIVHEDG TTYRKGSRPT ETTPPRVSAC
101: SSIQLSPHSS AFQSPVPSYQ ASPASSSYPS PTRFDPNHSS TYLIPYLQNL ASSGNLAPLR ISNSAPVTPP VSSPRGSHPR LPKPQFSNFP VSAPSSPTRR
201: LHHHYTSIPE CDESDVSTVD SCRWTRFQPV TVSQTCPPSP TFNLVKNSVC VGGGDVSVKP WEGEKIHDVG VDDLELTLGN AKGRG
101: SSIQLSPHSS AFQSPVPSYQ ASPASSSYPS PTRFDPNHSS TYLIPYLQNL ASSGNLAPLR ISNSAPVTPP VSSPRGSHPR LPKPQFSNFP VSAPSSPTRR
201: LHHHYTSIPE CDESDVSTVD SCRWTRFQPV TVSQTCPPSP TFNLVKNSVC VGGGDVSVKP WEGEKIHDVG VDDLELTLGN AKGRG
001: MTASGGGSTA ATGRMPTWKE RENNKKRERR RRAIAAKIFT GLRSQGNYKL PKHCDNNEVL KALCLEAGWI VHEDGTTYRK GSRPTETTVP CSSIQLSPQS
101: SAFQSPIPSY QASPSSSSYP SPTRFDPNQS STYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRRSNP RLPRWQSSNF PVSAPSSPTR RLHHYTSIPE
201: CDESDVSTVD SCRWGNFQSV NVSQTCPPSP TFNLVGKSVS SVGVDVSVKP WEGEKIHDVG IDDLELTLGH NTKGRG
101: SAFQSPIPSY QASPSSSSYP SPTRFDPNQS STYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRRSNP RLPRWQSSNF PVSAPSSPTR RLHHYTSIPE
201: CDESDVSTVD SCRWGNFQSV NVSQTCPPSP TFNLVGKSVS SVGVDVSVKP WEGEKIHDVG IDDLELTLGH NTKGRG
Arabidopsis Description
BEH1BEH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.