Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- peroxisome 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96665 | Canola | plastid | 97.63 | 98.8 |
| Bra016508.1-P | Field mustard | plastid | 97.33 | 98.5 |
| CDY50574 | Canola | nucleus, plastid | 91.99 | 93.66 |
| CDY26676 | Canola | nucleus, plastid | 91.69 | 93.64 |
| CDX81925 | Canola | nucleus | 82.49 | 86.34 |
| CDX68150 | Canola | nucleus | 81.01 | 82.48 |
| AT1G19350.3 | Thale cress | nucleus | 86.94 | 82.07 |
| CDX73140 | Canola | nucleus | 62.31 | 81.71 |
| CDY59466 | Canola | nucleus | 80.42 | 81.38 |
| CDY69925 | Canola | nucleus, plastid | 68.25 | 80.42 |
| CDY21670 | Canola | nucleus | 81.6 | 71.24 |
| KRH51888 | Soybean | nucleus | 64.39 | 67.81 |
| KRH15250 | Soybean | nucleus | 61.42 | 66.56 |
| KRH61201 | Soybean | nucleus | 62.61 | 65.94 |
| KRH05791 | Soybean | nucleus | 60.83 | 65.92 |
| PGSC0003DMT400039879 | Potato | nucleus, plastid | 61.42 | 62.73 |
| GSMUA_Achr7P26010_001 | Banana | nucleus | 53.41 | 62.5 |
| Os07t0580500-01 | Rice | nucleus | 55.19 | 62.42 |
| PGSC0003DMT400071585 | Potato | cytosol, nucleus, peroxisome | 51.04 | 62.32 |
| Solyc12g089040.1.1 | Tomato | nucleus | 61.42 | 62.16 |
| GSMUA_Achr2P06600_001 | Banana | nucleus | 48.37 | 60.82 |
| VIT_18s0001g12020.t01 | Wine grape | nucleus | 54.9 | 60.26 |
| Solyc04g079980.2.1 | Tomato | nucleus | 58.16 | 59.94 |
| CDY64371 | Canola | nucleus | 49.85 | 58.95 |
| TraesCS2D01G199900.1 | Wheat | nucleus | 54.6 | 58.79 |
| GSMUA_Achr3P29980_001 | Banana | nucleus | 51.93 | 58.53 |
| TraesCS2B01G219300.1 | Wheat | nucleus | 54.3 | 58.47 |
| TraesCS2A01G187800.1 | Wheat | nucleus | 54.3 | 58.47 |
| GSMUA_Achr8P31150_001 | Banana | nucleus | 51.04 | 58.31 |
| CDX90690 | Canola | nucleus | 49.26 | 58.25 |
| CDX69246 | Canola | nucleus | 51.04 | 56.77 |
| EER99604 | Sorghum | nucleus, plastid | 56.38 | 56.55 |
| CDX75598 | Canola | nucleus | 50.45 | 56.11 |
| Zm00001d021927_P001 | Maize | nucleus | 52.52 | 55.84 |
| CDY37261 | Canola | mitochondrion | 17.51 | 55.14 |
| CDX72603 | Canola | nucleus | 49.85 | 55.08 |
| Zm00001d006677_P001 | Maize | nucleus | 52.23 | 54.32 |
| CDY62653 | Canola | nucleus | 49.55 | 54.05 |
| CDX78903 | Canola | nucleus | 40.65 | 49.64 |
| CDX98592 | Canola | nucleus | 39.76 | 48.55 |
| CDY01563 | Canola | nucleus | 39.76 | 48.55 |
| HORVU0Hr1G040070.2 | Barley | cytosol, mitochondrion | 38.87 | 46.79 |
| CDY14593 | Canola | nucleus | 39.47 | 45.39 |
| CDY26877 | Canola | nucleus | 38.87 | 44.71 |
| CDX99414 | Canola | nucleus | 40.36 | 44.16 |
| CDX88466 | Canola | nucleus | 39.47 | 43.32 |
| CDX87440 | Canola | nucleus | 39.47 | 43.32 |
| CDY66394 | Canola | plastid | 13.35 | 32.37 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | EnsemblPlants:CDX83768 | ProteinID:CDX83768 |
| ProteinID:CDX83768.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00139508001 | PFAM:PF05687 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF6 | UniParc:UPI0004EDCDA6 |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g18770D
Coordinates
chrLK031834:-:330649..332255
Molecular Weight (calculated)
36622.5 Da
IEP (calculated)
9.543
GRAVY (calculated)
-0.657
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSDGATSTS AAAAMAATRR KPSWRERENN RRRERRRRAV AAKIYTGLRA QGNYNLPKHC DNNEVLKALC SEAGWVVEED GTTYRKGHKP PSLPGDVAGS
101: SSRATPYSSY NQSPFESPIL SYQVSPSSSS FPSPSRGGGD THNNISTIFP FLRNGGIPSS LPPLRISNSA PVTPPVSSPS SKHTKALPTW GECFTNQSMA
201: IAAKQSMSSF NYPFYAVSAP ASPTHHRQFN APPATIPECD ESDASTVDSG HWISFQKFSQ QQPFLGVSAV PASPTFNLVR PPVPQQLSPN TGATQEIGQS
301: SEFKFENRQV KPWEGERIHD VAMEDLELTL GNAKGRI
101: SSRATPYSSY NQSPFESPIL SYQVSPSSSS FPSPSRGGGD THNNISTIFP FLRNGGIPSS LPPLRISNSA PVTPPVSSPS SKHTKALPTW GECFTNQSMA
201: IAAKQSMSSF NYPFYAVSAP ASPTHHRQFN APPATIPECD ESDASTVDSG HWISFQKFSQ QQPFLGVSAV PASPTFNLVR PPVPQQLSPN TGATQEIGQS
301: SEFKFENRQV KPWEGERIHD VAMEDLELTL GNAKGRI
001: MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV
101: VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV
201: SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV
301: KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL GNGKAHS
101: VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV
201: SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV
301: KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL GNGKAHS
Arabidopsis Description
BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.