CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01563	Canola	nucleus	99.28	99.28
Bra012570.1-P	Field mustard	nucleus	98.91	98.91
CDX78903	Canola	nucleus	96.01	96.01
AT4G18890.1	Thale cress	nucleus	97.1	94.37
CDX99414	Canola	nucleus	95.65	85.71
PGSC0003DMT400073250	Potato	nucleus	75.36	63.8
Solyc03g005990.2.1	Tomato	nucleus	74.28	63.47
PGSC0003DMT400071511	Potato	nucleus	74.28	63.47
Solyc02g071990.2.1	Tomato	nucleus	73.91	62.96
VIT_10s0003g01790.t01	Wine grape	nucleus	75.72	61.29
CDY14593	Canola	nucleus	63.04	59.39
CDX88466	Canola	nucleus	65.94	59.28
CDX87440	Canola	nucleus	65.94	59.28
CDY26877	Canola	nucleus	62.68	59.04
CDY66394	Canola	plastid	25.36	50.36
CDX90690	Canola	nucleus	46.74	45.26
CDY64371	Canola	nucleus	46.74	45.26
CDX69246	Canola	nucleus	49.28	44.88
CDX75598	Canola	nucleus	49.28	44.88
CDX72603	Canola	nucleus	49.28	44.59
CDY62653	Canola	nucleus	49.28	44.01
CDX73140	Canola	nucleus	38.41	41.25
CDY26676	Canola	nucleus, plastid	48.55	40.61
CDX96665	Canola	plastid	48.55	40.24
CDY50574	Canola	nucleus, plastid	48.19	40.18
CDY69925	Canola	nucleus, plastid	41.3	39.86
CDX83768	Canola	plastid	48.55	39.76
CDX81925	Canola	nucleus	46.38	39.75
CDX68150	Canola	nucleus	46.74	38.97
CDY59466	Canola	nucleus	46.74	38.74
CDY21670	Canola	nucleus	46.74	33.42
CDY37261	Canola	mitochondrion	12.68	32.71

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	InterPro:BES1_N	InterPro:BZR	EnsemblPlants:CDX98592	ProteinID:CDX98592
ProteinID:CDX98592.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009742
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00106620001	PFAM:PF05687	PANTHER:PTHR31506	PANTHER:PTHR31506:SF10	UniParc:UPI0004EE7138
SEG:seg	:	:	:	:	:

Description

BnaA03g43770D

Coordinates

chrLK031906:+:3278..5483

Molecular Weight (calculated)

30044.0 Da

IEP (calculated)

8.369

GRAVY (calculated)

-0.721

Length

276 amino acids

Sequence
(BLAST)

001: MTSGTRTPTW KERENNKRRE RRRRAIAAKI FAGLRIHGNF KLPKHCDNNE VLKALCNEAG WTVEDDGTTY RKGCKPTDRM ELMNGSTSAS PCSSYQPSPR
101: GSYNPSPSSS SFPSPTNPFG DANSLIPWLK NLSSNSPSKL PFFNGNSISA PVTPPLARSP TYDQVTIPDS GWLSGMQTPQ SGPSSPTFSL VSRNPFFDKE
201: AFKMGDSNSP MWTPGQSGNC SPAIPAGVDQ NSDVPMADGM AAEFAFGMVK PWEGERIHGE CVSDDLELTL GNSRTR

Best Arabidopsis Sequence Match ( AT4G18890.1 )
(BLAST)

001: MTSGTRTPTW KERENNKRRE RRRRAIAAKI FAGLRIHGNF KLPKHCDNNE VLKALCNEAG WTVEDDGTTY RKGCKPMDRM DLMNGSTSAS PCSSYQHSPR
101: ASYNPSPSSS SFPSPTNPFG DANSLIPWLK NLSSNSPSKL PFFHGNSISA PVTPPLARSP TRDQVTIPDS GWLSGMQTPQ SGPSSPTFSL VSRNPFFDKE
201: AFKMGDCNSP MWTPGQSGNC SPAIPAGVDQ NSDVPMADGM TAEFAFGCNA MAANGMVKPW EGERIHGECV SDDLELTLGN SRTR

Arabidopsis Description

BEH3BES1/BZR1 homolog protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O49404]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.