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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 4
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68150 Canola nucleus 97.0 97.58
AT1G75080.2 Thale cress nucleus 93.39 92.56
CDX73140 Canola nucleus 69.67 90.27
CDY69925 Canola nucleus, plastid 77.48 90.21
CDY50574 Canola nucleus, plastid 83.18 83.69
CDY26676 Canola nucleus, plastid 82.88 83.64
CDX96665 Canola plastid 80.48 80.48
CDX83768 Canola plastid 81.38 80.42
CDX81925 Canola nucleus 74.17 76.71
KRH15250 Soybean nucleus 65.47 70.1
KRH05791 Soybean nucleus 64.26 68.81
KRH51888 Soybean nucleus 66.07 68.75
KRH61201 Soybean nucleus 64.56 67.19
PGSC0003DMT400071585 Potato cytosol, nucleus, peroxisome 54.95 66.3
PGSC0003DMT400039879 Potato nucleus, plastid 64.26 64.85
Solyc12g089040.1.1 Tomato nucleus 64.26 64.26
CDY21670 Canola nucleus 74.17 63.99
GSMUA_Achr7P26010_001 Banana nucleus 55.26 63.89
Solyc04g079980.2.1 Tomato nucleus 62.16 63.3
VIT_18s0001g12020.t01 Wine grape nucleus 57.66 62.54
Os07t0580500-01 Rice nucleus 55.56 62.08
CDY37261 Canola mitochondrion 19.52 60.75
CDY64371 Canola nucleus 51.95 60.7
GSMUA_Achr2P06600_001 Banana nucleus 48.65 60.45
CDX90690 Canola nucleus 51.05 59.65
GSMUA_Achr8P31150_001 Banana nucleus 52.25 58.98
GSMUA_Achr3P29980_001 Banana nucleus 52.55 58.53
CDX75598 Canola nucleus 53.15 58.42
CDX69246 Canola nucleus 52.85 58.09
TraesCS2D01G199900.1 Wheat nucleus 54.35 57.83
TraesCS2B01G219300.1 Wheat nucleus 54.35 57.83
TraesCS2A01G187800.1 Wheat nucleus 54.35 57.83
CDX72603 Canola nucleus 51.95 56.72
CDY62653 Canola nucleus 52.25 56.31
EER99604 Sorghum nucleus, plastid 55.86 55.36
Zm00001d021927_P001 Maize nucleus 51.95 54.57
Zm00001d006677_P001 Maize nucleus 51.95 53.4
CDX78903 Canola nucleus 39.64 47.83
CDX98592 Canola nucleus 38.74 46.74
CDY01563 Canola nucleus 38.74 46.74
HORVU0Hr1G040070.2 Barley cytosol, mitochondrion 38.44 45.71
CDY14593 Canola nucleus 39.04 44.37
CDY26877 Canola nucleus 38.44 43.69
CDX99414 Canola nucleus 39.34 42.53
CDX88466 Canola nucleus 38.44 41.69
CDX87440 Canola nucleus 38.14 41.37
CDY66394 Canola plastid 12.31 29.5
Protein Annotations
MapMan:11.3.2.4MapMan:15.5.39UniProt:A0A078J7R2InterPro:BES1_NInterPro:BZREnsemblPlants:CDY59466
ProteinID:CDY59466ProteinID:CDY59466.1GO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009719GO:GO:0009742GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00026156001PFAM:PF05687PANTHER:PTHR31506
PANTHER:PTHR31506:SF6UniParc:UPI0004EF1984SEG:seg:::
Description
BnaCnng34980DBnaCnng34980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7R2]
Coordinates
chrLK033765:+:39486..41444
Molecular Weight (calculated)
36190.0 Da
IEP (calculated)
8.928
GRAVY (calculated)
-0.668
Length
333 amino acids
Sequence
(BLAST)
001: MTSDGATSTS AAAAAAAAAR RKPSWREREN NRRRERRRRA VAAKIYTGLR AQGDYNLPKH CDNNEVLKAL CSEAGWVVEE DGTTYRKGCK PLPSEIAGTS
101: YHHYSSQNQS PLSSAFQSPI PSYQVSPSSS SFPSPSRGEP NNNSSPFFPF LGNGGIPSSL LSLRISNSCP VTPPLSSPTS KNPKPLPNWE SIAKQSMANA
201: KQSMASFNYP FYAVSAPASP THRQFHAPAT IPECDESDAS TVDSGHWISF QKFAQQQPFS GSMVPTSPTF NLVKPPPVPQ HMSPNAAGVF QEIGQSSEFK
301: FENRQVKPWE GEMIHDVGME DLELTLGNGK ARG
Best Arabidopsis Sequence Match ( AT1G75080.1 )
(BLAST)
001: MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG
Arabidopsis Description
BZR1Protein BRASSINAZOLE-RESISTANT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S307]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.