Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g089040.1.1 | Tomato | nucleus | 98.48 | 97.6 |
| PGSC0003DMT400071585 | Potato | cytosol, nucleus, peroxisome | 72.42 | 86.59 |
| AT1G75080.2 | Thale cress | nucleus | 66.67 | 65.48 |
| CDX73140 | Canola | nucleus | 50.91 | 65.37 |
| CDX68150 | Canola | nucleus | 64.85 | 64.65 |
| Bra003772.1-P | Field mustard | nucleus | 64.55 | 64.35 |
| CDY59466 | Canola | nucleus | 64.85 | 64.26 |
| GSMUA_Achr7P26010_001 | Banana | nucleus | 56.06 | 64.24 |
| KRH15250 | Soybean | nucleus | 60.0 | 63.67 |
| GSMUA_Achr2P06600_001 | Banana | nucleus | 51.21 | 63.06 |
| CDY26676 | Canola | nucleus, plastid | 63.03 | 63.03 |
| CDY69925 | Canola | nucleus, plastid | 54.55 | 62.94 |
| CDY50574 | Canola | nucleus, plastid | 63.03 | 62.84 |
| Bra025733.1-P | Field mustard | nucleus, plastid | 63.03 | 62.84 |
| KRH51888 | Soybean | nucleus | 60.91 | 62.81 |
| KRH05791 | Soybean | nucleus | 58.79 | 62.38 |
| CDX96665 | Canola | plastid | 62.73 | 62.16 |
| VIT_18s0001g12020.t01 | Wine grape | nucleus | 57.58 | 61.89 |
| KRH61201 | Soybean | nucleus | 60.0 | 61.88 |
| Bra016508.1-P | Field mustard | plastid | 62.42 | 61.86 |
| CDX83768 | Canola | plastid | 62.73 | 61.42 |
| Bra015868.1-P | Field mustard | nucleus, plastid | 58.18 | 61.15 |
| GSMUA_Achr3P29980_001 | Banana | nucleus | 55.15 | 60.87 |
| CDX81925 | Canola | nucleus | 59.09 | 60.56 |
| AT1G19350.3 | Thale cress | nucleus | 65.45 | 60.5 |
| GSMUA_Achr8P31150_001 | Banana | nucleus | 53.94 | 60.34 |
| Os07t0580500-01 | Rice | nucleus | 53.94 | 59.73 |
| PGSC0003DMT400011470 | Potato | nucleus | 57.58 | 59.56 |
| TraesCS2D01G199900.1 | Wheat | nucleus | 53.03 | 55.91 |
| TraesCS2B01G219300.1 | Wheat | nucleus | 52.73 | 55.59 |
| TraesCS2A01G187800.1 | Wheat | nucleus | 52.73 | 55.59 |
| Zm00001d021927_P001 | Maize | nucleus | 51.52 | 53.63 |
| EER99604 | Sorghum | nucleus, plastid | 53.64 | 52.68 |
| Zm00001d006677_P001 | Maize | nucleus | 51.52 | 52.47 |
| CDY21670 | Canola | nucleus | 59.39 | 50.78 |
| Bra031077.1-P | Field mustard | nucleus | 59.39 | 50.78 |
| HORVU0Hr1G040070.2 | Barley | cytosol, mitochondrion | 41.21 | 48.57 |
| PGSC0003DMT400071511 | Potato | nucleus | 43.33 | 44.27 |
| PGSC0003DMT400018282 | Potato | nucleus | 42.12 | 44.13 |
| PGSC0003DMT400073250 | Potato | nucleus | 43.03 | 43.56 |
| CDY37261 | Canola | mitochondrion | 13.64 | 42.06 |
| PGSC0003DMT400091592 | Potato | cytosol, nucleus, plastid | 16.06 | 29.12 |
Protein Annotations
| EntrezGene:102597810 | MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 |
| UniProt:M1B8X3 | PFAM:PF05687 | EnsemblPlantsGene:PGSC0003DMG400015424 | PGSC:PGSC0003DMG400015424 | EnsemblPlants:PGSC0003DMT400039879 | PANTHER:PTHR31506 |
| PANTHER:PTHR31506:SF6 | UniParc:UPI000295E58F | RefSeq:XP_006342599.1 | SEG:seg | : | : |
Description
Mature anther-specific protein LAT61 [Source:PGSC_GENE;Acc:PGSC0003DMG400015424]
Coordinates
chr12:+:56801181..56804136
Molecular Weight (calculated)
35568.5 Da
IEP (calculated)
8.877
GRAVY (calculated)
-0.641
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MMWEAGESPA SSSAGAGAGG SGGAGVGIPE SGGGGRRKPS WRERENNRRR ERRRRAVAAK IYTGLRAQGN YNLPKHCDNN EVLKALCTEA GWIVEPDGTT
101: YRKGCKPTPM EIGGTSTNIT PSSSRHPSPP SSYFASPIPS YQPSPTSSSF PSPSRADANM SSHPYSFLHN VIPSSLPPLR ISNSAPVTPP LSSPTRHPKQ
201: TFNLETLAKE SMFALNIPFF AASAPASPTR GQRFTPPTIP ECDESDSSTI DSGQWINFQK YAANVPPSPT FNLVKPVPQP LRPNDMITDK GKSIDFDFEN
301: VSVKAWEGER IHDVGFDDLE LTLGSGNARI
101: YRKGCKPTPM EIGGTSTNIT PSSSRHPSPP SSYFASPIPS YQPSPTSSSF PSPSRADANM SSHPYSFLHN VIPSSLPPLR ISNSAPVTPP LSSPTRHPKQ
201: TFNLETLAKE SMFALNIPFF AASAPASPTR GQRFTPPTIP ECDESDSSTI DSGQWINFQK YAANVPPSPT FNLVKPVPQP LRPNDMITDK GKSIDFDFEN
301: VSVKAWEGER IHDVGFDDLE LTLGSGNARI
001: MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG
Arabidopsis Description
BZR1Protein BRASSINAZOLE-RESISTANT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S307]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.