Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g079980.2.1 | Tomato | nucleus | 99.28 | 83.79 |
| PGSC0003DMT400039879 | Potato | nucleus, plastid | 86.59 | 72.42 |
| VIT_18s0001g12020.t01 | Wine grape | nucleus | 62.68 | 56.35 |
| KRH15250 | Soybean | nucleus | 63.41 | 56.27 |
| GSMUA_Achr7P26010_001 | Banana | nucleus | 58.7 | 56.25 |
| AT1G75080.2 | Thale cress | nucleus | 68.12 | 55.95 |
| KRH05791 | Soybean | nucleus | 63.04 | 55.95 |
| CDX68150 | Canola | nucleus | 67.03 | 55.89 |
| Bra003772.1-P | Field mustard | nucleus | 66.67 | 55.59 |
| KRH51888 | Soybean | nucleus | 64.13 | 55.31 |
| KRH61201 | Soybean | nucleus | 63.77 | 55.0 |
| CDY59466 | Canola | nucleus | 66.3 | 54.95 |
| GSMUA_Achr2P06600_001 | Banana | nucleus | 52.9 | 54.48 |
| CDX73140 | Canola | nucleus | 50.72 | 54.47 |
| PGSC0003DMT400011470 | Potato | nucleus | 61.96 | 53.6 |
| Os07t0580500-01 | Rice | nucleus | 57.61 | 53.36 |
| CDY26676 | Canola | nucleus, plastid | 63.77 | 53.33 |
| CDY50574 | Canola | nucleus, plastid | 63.77 | 53.17 |
| Bra025733.1-P | Field mustard | nucleus, plastid | 63.77 | 53.17 |
| GSMUA_Achr3P29980_001 | Banana | nucleus | 57.25 | 52.84 |
| CDX96665 | Canola | plastid | 63.04 | 52.25 |
| CDY69925 | Canola | nucleus, plastid | 53.99 | 52.1 |
| Bra016508.1-P | Field mustard | plastid | 62.68 | 51.95 |
| GSMUA_Achr8P31150_001 | Banana | nucleus | 55.43 | 51.86 |
| CDX81925 | Canola | nucleus | 60.51 | 51.86 |
| CDX83768 | Canola | plastid | 62.32 | 51.04 |
| AT1G19350.3 | Thale cress | nucleus | 65.94 | 50.98 |
| Bra015868.1-P | Field mustard | nucleus, plastid | 57.97 | 50.96 |
| TraesCS2D01G199900.1 | Wheat | nucleus | 56.16 | 49.52 |
| TraesCS2B01G219300.1 | Wheat | nucleus | 55.8 | 49.2 |
| TraesCS2A01G187800.1 | Wheat | nucleus | 55.8 | 49.2 |
| Zm00001d021927_P001 | Maize | nucleus | 54.35 | 47.32 |
| EER99604 | Sorghum | nucleus, plastid | 56.88 | 46.73 |
| Zm00001d006677_P001 | Maize | nucleus | 53.62 | 45.68 |
| Bra031077.1-P | Field mustard | nucleus | 61.23 | 43.78 |
| CDY21670 | Canola | nucleus | 61.23 | 43.78 |
| HORVU0Hr1G040070.2 | Barley | cytosol, mitochondrion | 40.22 | 39.64 |
| PGSC0003DMT400071511 | Potato | nucleus | 44.57 | 38.08 |
| PGSC0003DMT400073250 | Potato | nucleus | 44.2 | 37.42 |
| PGSC0003DMT400018282 | Potato | nucleus | 42.03 | 36.83 |
| CDY37261 | Canola | mitochondrion | 13.77 | 35.51 |
| PGSC0003DMT400091592 | Potato | cytosol, nucleus, plastid | 13.04 | 19.78 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | UniProt:M1CP01 |
| PFAM:PF05687 | EnsemblPlantsGene:PGSC0003DMG400027849 | PGSC:PGSC0003DMG400027849 | EnsemblPlants:PGSC0003DMT400071585 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF6 |
| UniParc:UPI000294C460 | SEG:seg | : | : | : | : |
Description
Mature anther-specific protein LAT61 [Source:PGSC_GENE;Acc:PGSC0003DMG400027849]
Coordinates
chr4:+:69361740..69363676
Molecular Weight (calculated)
29708.0 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.372
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKIYSGLR AQGNYNLPKH CDNNEVLKAL CVEAGWIVEP DGTTYRKGCR PTPMEIGGTS ANITPSSSRN PSPPSSYFAS PIPSYQPSPT SSSFPSPSRG
101: DANMSSHPFA FLHSSIPLSL PPLRISNSAP VTPPLSSPTR VPKQIFNLET LARESMSALN IPFFAASAPT SPTRGQRFTP ATIPECDESD SSTIDSGQWM
201: SFQKYAANGI PTSPTFNLIK PVAQRIPSND MIIDKGKSIE FDFENVSVKA AWEGEKIHEV GLDDLELTLG SGTARM
101: DANMSSHPFA FLHSSIPLSL PPLRISNSAP VTPPLSSPTR VPKQIFNLET LARESMSALN IPFFAASAPT SPTRGQRFTP ATIPECDESD SSTIDSGQWM
201: SFQKYAANGI PTSPTFNLIK PVAQRIPSND MIIDKGKSIE FDFENVSVKA AWEGEKIHEV GLDDLELTLG SGTARM
001: MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG
Arabidopsis Description
BZR1Protein BRASSINAZOLE-RESISTANT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S307]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.