CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50574	Canola	nucleus, plastid	98.79	98.49
CDX83768	Canola	plastid	93.64	91.69
CDX96665	Canola	plastid	92.42	91.59
CDX81925	Canola	nucleus	84.55	86.65
CDX68150	Canola	nucleus	84.24	83.99
AT1G19350.3	Thale cress	nucleus	90.0	83.19
CDY59466	Canola	nucleus	83.64	82.88
CDX73140	Canola	nucleus	63.03	80.93
CDY69925	Canola	nucleus, plastid	69.7	80.42
CDY21670	Canola	nucleus	83.94	71.76
KRH15250	Soybean	nucleus	63.94	67.85
KRH51888	Soybean	nucleus	65.76	67.81
KRH05791	Soybean	nucleus	63.33	67.2
KRH61201	Soybean	nucleus	63.94	65.94
PGSC0003DMT400071585	Potato	cytosol, nucleus, peroxisome	53.33	63.77
PGSC0003DMT400039879	Potato	nucleus, plastid	63.03	63.03
Os07t0580500-01	Rice	nucleus	56.67	62.75
Solyc12g089040.1.1	Tomato	nucleus	63.03	62.46
GSMUA_Achr7P26010_001	Banana	nucleus	54.24	62.15
Solyc04g079980.2.1	Tomato	nucleus	60.61	61.16
GSMUA_Achr2P06600_001	Banana	nucleus	49.39	60.82
VIT_18s0001g12020.t01	Wine grape	nucleus	56.06	60.26
CDY64371	Canola	nucleus	51.21	59.3
TraesCS2D01G199900.1	Wheat	nucleus	55.76	58.79
CDX90690	Canola	nucleus	50.61	58.6
GSMUA_Achr3P29980_001	Banana	nucleus	53.03	58.53
TraesCS2B01G219300.1	Wheat	nucleus	55.45	58.47
TraesCS2A01G187800.1	Wheat	nucleus	55.45	58.47
GSMUA_Achr8P31150_001	Banana	nucleus	51.52	57.63
EER99604	Sorghum	nucleus, plastid	57.88	56.85
CDX69246	Canola	nucleus	51.82	56.44
Zm00001d021927_P001	Maize	nucleus	53.94	56.15
CDY37261	Canola	mitochondrion	18.18	56.07
CDX75598	Canola	nucleus	51.21	55.78
CDX72603	Canola	nucleus	50.91	55.08
Zm00001d006677_P001	Maize	nucleus	53.64	54.63
CDY62653	Canola	nucleus	50.91	54.37
CDX78903	Canola	nucleus	41.52	49.64
CDY01563	Canola	nucleus	40.61	48.55
CDX98592	Canola	nucleus	40.61	48.55
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	39.7	46.79
CDY14593	Canola	nucleus	40.0	45.05
CDY26877	Canola	nucleus	39.39	44.37
CDX99414	Canola	nucleus	41.21	44.16
CDX88466	Canola	nucleus	40.3	43.32
CDX87440	Canola	nucleus	40.0	43.0
CDY66394	Canola	plastid	13.03	30.94

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	UniProt:A0A078GMX0	InterPro:BES1_N	InterPro:BZR	EnsemblPlants:CDY26676
ProteinID:CDY26676	ProteinID:CDY26676.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00035564001	PFAM:PF05687	PANTHER:PTHR31506
PANTHER:PTHR31506:SF6	UniParc:UPI0004EF2F9A	SEG:seg	:	:	:

Description

BnaA06g13460DBnaA06g13460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMX0]

Coordinates

chrLK032193:-:62114..63740

Molecular Weight (calculated)

36071.9 Da

IEP (calculated)

9.830

GRAVY (calculated)

-0.693

Length

330 amino acids

Sequence
(BLAST)

001: MTSDGATSTS AAAAALATRR KPSWRERENN RRRERRRRAV AAKIYNGLRA QGNYNLPKHC DNNEVLKALC SEAGWVVEED GTTYRKGHKP LPGDIAGSSS
101: RASPYSSSYN QSPFESPILS YQVSPSSSSF PSPSRGDNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV SSPTNKHPKP LPTWESFTKQ SMAIAAKQSM
201: SSFNYPFYAV SAPASPTHHR QFNAPATIPE CDESDASTVD SGHWISFQKF SQQQQPFHGV SSAVPASPTF NLVKPPVPQR LSPNTAGIQE IGQSSEFKFE
301: NRQVTPWEGE RIHDVAMEDL ELTLGNAKGR

Best Arabidopsis Sequence Match ( AT1G19350.1 )
(BLAST)

001: MTSDGATSTS AAAAAAAMAT RRKPSWRERE NNRRRERRRR AVAAKIYTGL RAQGNYNLPK HCDNNEVLKA LCSEAGWVVE EDGTTYRKGH KPLPGDMAGS
101: SSRATPYSSH NQSPLSSTFD SPILSYQVSP SSSSFPSPSR VGDPHNISTI FPFLRNGGIP SSLPPLRISN SAPVTPPVSS PTSRNPKPLP TWESFTKQSM
201: SMAAKQSMTS LNYPFYAVSA PASPTHHRQF HAPATIPECD ESDSSTVDSG HWISFQKFAQ QQPFSASMVP TSPTFNLVKP APQQLSPNTA AIQEIGQSSE
301: FKFENSQVKP WEGERIHDVA MEDLELTLGN GKAHS

Arabidopsis Description

BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.