Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78903 | Canola | nucleus | 88.64 | 98.91 |
| Bra013359.1-P | Field mustard | nucleus | 88.64 | 98.91 |
| CDY01563 | Canola | nucleus | 85.71 | 95.65 |
| CDX98592 | Canola | nucleus | 85.71 | 95.65 |
| Solyc03g005990.2.1 | Tomato | nucleus | 65.58 | 62.54 |
| PGSC0003DMT400071511 | Potato | nucleus | 65.58 | 62.54 |
| PGSC0003DMT400073250 | Potato | nucleus | 65.91 | 62.27 |
| Solyc02g071990.2.1 | Tomato | nucleus | 64.94 | 61.73 |
| VIT_10s0003g01790.t01 | Wine grape | nucleus | 66.88 | 60.41 |
| CDY26877 | Canola | nucleus | 55.19 | 58.02 |
| CDX88466 | Canola | nucleus | 57.79 | 57.98 |
| CDY14593 | Canola | nucleus | 54.87 | 57.68 |
| CDX87440 | Canola | nucleus | 57.47 | 57.65 |
| CDY66394 | Canola | plastid | 21.43 | 47.48 |
| CDX90690 | Canola | nucleus | 42.21 | 45.61 |
| CDY64371 | Canola | nucleus | 42.21 | 45.61 |
| CDX69246 | Canola | nucleus | 44.81 | 45.54 |
| CDX75598 | Canola | nucleus | 44.16 | 44.88 |
| CDX72603 | Canola | nucleus | 44.16 | 44.59 |
| CDY62653 | Canola | nucleus | 44.16 | 44.01 |
| CDX73140 | Canola | nucleus | 35.06 | 42.02 |
| CDY26676 | Canola | nucleus, plastid | 44.16 | 41.21 |
| CDX96665 | Canola | plastid | 44.16 | 40.84 |
| CDY50574 | Canola | nucleus, plastid | 43.83 | 40.79 |
| CDX81925 | Canola | nucleus | 42.53 | 40.68 |
| CDY69925 | Canola | nucleus, plastid | 37.66 | 40.56 |
| CDX83768 | Canola | plastid | 44.16 | 40.36 |
| CDX68150 | Canola | nucleus | 42.53 | 39.58 |
| CDY59466 | Canola | nucleus | 42.53 | 39.34 |
| CDY21670 | Canola | nucleus | 42.53 | 33.94 |
| CDY37261 | Canola | mitochondrion | 11.69 | 33.64 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | EnsemblPlants:CDX99414 | ProteinID:CDX99414 |
| ProteinID:CDX99414.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00107743001 | PFAM:PF05687 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF10 | UniParc:UPI0004EEE4C7 |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g11380D
Coordinates
chrLK031910:-:546427..549885
Molecular Weight (calculated)
33995.3 Da
IEP (calculated)
10.154
GRAVY (calculated)
-0.618
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSGTRTPTW KERENNKRRE RRRRAIAAKI FAGLRIHGNF KLPKHCDNNE VLKALCNEAG WTVEEDGTTY RKRKRKILMM QIGRLRFSFY RFSGHGKRQI
101: ETVLGCKPMD RVELMNGSTS ASPCSSYQPS PRGSYNPSPS SSSFPSPTNI FGDANSLIPW LKNLSSNSPS KLPFFHGNSI SAPVTPPLAR SPTRDQVIIP
201: ESGWLSGMQT PQSGPSSPTF SLVSRNPFFD KAAFKMGDCS SPMWTPGQSG NCSPAIPAGV DQNSDVPMAD GMAAEFAFGM VKPWEGERIH GECVSEDLEL
301: TLGNSRTR
101: ETVLGCKPMD RVELMNGSTS ASPCSSYQPS PRGSYNPSPS SSSFPSPTNI FGDANSLIPW LKNLSSNSPS KLPFFHGNSI SAPVTPPLAR SPTRDQVIIP
201: ESGWLSGMQT PQSGPSSPTF SLVSRNPFFD KAAFKMGDCS SPMWTPGQSG NCSPAIPAGV DQNSDVPMAD GMAAEFAFGM VKPWEGERIH GECVSEDLEL
301: TLGNSRTR
001: MTSGTRTPTW KERENNKRRE RRRRAIAAKI FAGLRIHGNF KLPKHCDNNE VLKALCNEAG WTVEDDGTTY RKGCKPMDRM DLMNGSTSAS PCSSYQHSPR
101: ASYNPSPSSS SFPSPTNPFG DANSLIPWLK NLSSNSPSKL PFFHGNSISA PVTPPLARSP TRDQVTIPDS GWLSGMQTPQ SGPSSPTFSL VSRNPFFDKE
201: AFKMGDCNSP MWTPGQSGNC SPAIPAGVDQ NSDVPMADGM TAEFAFGCNA MAANGMVKPW EGERIHGECV SDDLELTLGN SRTR
101: ASYNPSPSSS SFPSPTNPFG DANSLIPWLK NLSSNSPSKL PFFHGNSISA PVTPPLARSP TRDQVTIPDS GWLSGMQTPQ SGPSSPTFSL VSRNPFFDKE
201: AFKMGDCNSP MWTPGQSGNC SPAIPAGVDQ NSDVPMADGM TAEFAFGCNA MAANGMVKPW EGERIHGECV SDDLELTLGN SRTR
Arabidopsis Description
BEH3BES1/BZR1 homolog protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O49404]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.