Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66394 | Canola | plastid | 44.3 | 97.84 |
| CDX87440 | Canola | nucleus | 97.72 | 97.72 |
| CDY26877 | Canola | nucleus | 86.97 | 91.13 |
| CDY14593 | Canola | nucleus | 86.97 | 91.13 |
| AT1G78700.1 | Thale cress | nucleus | 90.55 | 85.54 |
| KRH21913 | Soybean | nucleus | 70.36 | 66.46 |
| CDX98592 | Canola | nucleus | 59.28 | 65.94 |
| CDY01563 | Canola | nucleus | 59.28 | 65.94 |
| KRH27375 | Soybean | nucleus | 68.73 | 65.53 |
| CDX78903 | Canola | nucleus | 58.63 | 65.22 |
| PGSC0003DMT400018282 | Potato | nucleus | 66.12 | 64.44 |
| Solyc07g062260.2.1 | Tomato | nucleus | 65.47 | 63.81 |
| GSMUA_Achr10P... | Banana | nucleus | 57.0 | 62.28 |
| KRH27373 | Soybean | nucleus | 65.8 | 60.48 |
| GSMUA_Achr4P31020_001 | Banana | nucleus | 50.49 | 59.85 |
| KRH21914 | Soybean | nucleus | 64.82 | 59.58 |
| GSMUA_Achr2P15550_001 | Banana | mitochondrion, nucleus | 58.63 | 58.82 |
| CDX99414 | Canola | nucleus | 57.98 | 57.79 |
| GSMUA_Achr8P27730_001 | Banana | nucleus | 51.47 | 57.66 |
| GSMUA_Achr9P05670_001 | Banana | nucleus | 54.07 | 54.61 |
| EER88499 | Sorghum | nucleus, plastid | 62.87 | 54.21 |
| Zm00001d046305_P001 | Maize | nucleus, plastid | 62.22 | 53.8 |
| TraesCS3B01G156600.1 | Wheat | nucleus | 61.24 | 53.11 |
| Os06t0552300-01 | Rice | nucleus | 61.24 | 52.96 |
| TraesCS7D01G368000.1 | Wheat | nucleus | 61.89 | 52.92 |
| EES00101 | Sorghum | nucleus | 59.93 | 52.87 |
| TraesCS3A01G139000.1 | Wheat | nucleus | 61.24 | 52.81 |
| TraesCS7B01G272900.1 | Wheat | nucleus | 61.56 | 52.65 |
| TraesCS7A01G354800.1 | Wheat | nucleus | 61.56 | 52.65 |
| TraesCS3D01G139300.1 | Wheat | nucleus | 61.24 | 52.51 |
| Zm00001d039439_P001 | Maize | nucleus | 58.96 | 52.46 |
| Os01t0203000-01 | Rice | nucleus | 61.56 | 51.78 |
| Os02t0233200-00 | Rice | nucleus | 55.05 | 48.15 |
| HORVU7Hr1G088980.1 | Barley | cytosol, nucleus | 60.91 | 47.58 |
| TraesCS6A01G338000.1 | Wheat | nucleus | 53.75 | 47.55 |
| TraesCS6B01G368700.1 | Wheat | nucleus | 54.4 | 46.91 |
| CDY64371 | Canola | nucleus | 43.0 | 46.32 |
| CDX90690 | Canola | nucleus | 43.0 | 46.32 |
| TraesCS6D01G318800.1 | Wheat | nucleus | 52.12 | 45.98 |
| HORVU6Hr1G081650.1 | Barley | cytosol, nucleus, plastid | 55.7 | 44.88 |
| CDX72603 | Canola | nucleus | 43.97 | 44.26 |
| CDX69246 | Canola | nucleus | 43.32 | 43.89 |
| CDY62653 | Canola | nucleus | 43.97 | 43.69 |
| CDX75598 | Canola | nucleus | 43.0 | 43.56 |
| CDX73140 | Canola | nucleus | 35.83 | 42.8 |
| CDY69925 | Canola | nucleus, plastid | 38.76 | 41.61 |
| CDY26676 | Canola | nucleus, plastid | 43.32 | 40.3 |
| CDX96665 | Canola | plastid | 43.32 | 39.94 |
| CDY50574 | Canola | nucleus, plastid | 42.67 | 39.58 |
| CDX83768 | Canola | plastid | 43.32 | 39.47 |
| CDX81925 | Canola | nucleus | 41.04 | 39.13 |
| CDX68150 | Canola | nucleus | 41.69 | 38.67 |
| CDY59466 | Canola | nucleus | 41.69 | 38.44 |
| CDY21670 | Canola | nucleus | 40.72 | 32.38 |
| HORVU3Hr1G026420.2 | Barley | plastid | 45.93 | 32.27 |
| CDY37261 | Canola | mitochondrion | 11.07 | 31.78 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | EnsemblPlants:CDX88466 | ProteinID:CDX88466 |
| ProteinID:CDX88466.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00148012001 | PFAM:PF05687 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF10 | UniParc:UPI0004EC24DE |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g39100D
Coordinates
chrLK031855:+:1147637..1149913
Molecular Weight (calculated)
32898.3 Da
IEP (calculated)
8.475
GRAVY (calculated)
-0.539
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEQDGTTY RKGSSRPVER MEIGVGSATT SPCASYNPSP
101: VSSNFMSPSY ANLTSGDGQS LIPWLKHLST TSSSSASSSS RLPSFMYLPG GSISAPVTPP LSSPTARGMN QINNSFFVSS TPPSPTRQQT VPGSEWFAGI
201: QLAQSVPASP TFSLVSRNPF GFREDQLASA GGGGGSRMWT PGQSGTCSPA IPQTGDVPMS EAVAPPEFAF GSNANGLVKA WEGERIHEES GSDDLELTLG
301: NSSTRCN
101: VSSNFMSPSY ANLTSGDGQS LIPWLKHLST TSSSSASSSS RLPSFMYLPG GSISAPVTPP LSSPTARGMN QINNSFFVSS TPPSPTRQQT VPGSEWFAGI
201: QLAQSVPASP TFSLVSRNPF GFREDQLASA GGGGGSRMWT PGQSGTCSPA IPQTGDVPMS EAVAPPEFAF GSNANGLVKA WEGERIHEES GSDDLELTLG
301: NSSTRCN
001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR
Arabidopsis Description
BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.