Factsheet for TraesCS6A01G338000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G318800.1	Wheat	nucleus	92.8	92.53
TraesCS6B01G368700.1	Wheat	nucleus	90.78	88.48
HORVU6Hr1G081650.1	Barley	cytosol, nucleus, plastid	85.3	77.69
EER88499	Sorghum	nucleus, plastid	65.13	63.48
Zm00001d046305_P001	Maize	nucleus, plastid	64.84	63.38
GSMUA_Achr10P...	Banana	nucleus	50.72	62.63
Os02t0233200-00	Rice	nucleus	63.11	62.39
TraesCS7A01G354800.1	Wheat	nucleus	61.96	59.89
Bra008378.1-P	Field mustard	nucleus	47.84	56.85
CDY14593	Canola	nucleus	47.84	56.66
CDY26877	Canola	nucleus	47.55	56.31
GSMUA_Achr2P15550_001	Banana	mitochondrion, nucleus	49.28	55.88
Solyc07g062260.2.1	Tomato	nucleus	50.72	55.87
PGSC0003DMT400018282	Potato	nucleus	50.72	55.87
KRH21913	Soybean	nucleus	51.3	54.77
KRH27373	Soybean	nucleus	52.45	54.49
GSMUA_Achr8P27730_001	Banana	nucleus	42.94	54.38
KRH27375	Soybean	nucleus	50.43	54.35
CDX87440	Canola	nucleus	47.84	54.07
AT1G78700.1	Thale cress	nucleus	50.43	53.85
CDX88466	Canola	nucleus	47.55	53.75
KRH21914	Soybean	nucleus	51.59	53.59
Bra035060.1-P	Field mustard	nucleus	47.26	53.42
GSMUA_Achr4P31020_001	Banana	nucleus	39.48	52.9
TraesCS3A01G139000.1	Wheat	nucleus	53.89	52.53
GSMUA_Achr9P05670_001	Banana	nucleus	44.38	50.66
CDY66394	Canola	plastid	18.73	46.76
Bra020986.1-P	Field mustard	cytosol	18.73	42.76
TraesCS2A01G187800.1	Wheat	nucleus	38.04	42.17
TraesCS3A01G123500.1	Wheat	cytosol, nucleus, plastid	14.7	27.57

Protein Annotations

EnsemblPlants:TraesCS6A01G338000.1	EnsemblPlantsGene:TraesCS6A01G338000	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	InterPro:BES1_N	InterPro:BZR	PANTHER:PTHR31506	PANTHER:PTHR31506:SF2
PFAM:PF05687	SEG:seg	MapMan:11.3.2.4	MapMan:15.5.39	:	:

Description

No Description!

Coordinates

chr6A:+:571795518..571798307

Molecular Weight (calculated)

36421.1 Da

IEP (calculated)

8.558

GRAVY (calculated)

-0.564

Length

347 amino acids

Sequence
(BLAST)

001: MASRVPTWRE RENNRRRERR RRAVAANIFH GLRARGGYAL PKHCDNNEVL KALCDEAGWT VEPDGTTYRK GSKPVTAEGT NPMVRSGSPS PCSSHQVSPR
101: ASFPTSGTSS HTTLGGGRGS CYEGGSLIPW LKNLSSGSGF ASSSKFPRYS PHSYYFSGGS ISAPVTPPSG SPRRMPCLNA GWGEYPSAQV QPPWVGAGGS
201: GYDDYASLPN STPSSPRGGQ GVGPDPAAWL SGFQISSAGP SSPTYSLMAP SNPFRVSGEM AAATASSSRM RTPCQSGTCS PVALAVHGDV QMGARAEDDF
301: EFGSGGRPVS VNAWEGERIH EVCASDEPEL DLTLGLGSSN TRASALN

Best Arabidopsis Sequence Match ( AT1G78700.1 )
(BLAST)

001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR

Arabidopsis Description

BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.