Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400073250 | Potato | nucleus | 96.6 | 96.01 |
| Solyc03g005990.2.1 | Tomato | nucleus | 87.35 | 87.62 |
| VIT_10s0003g01790.t01 | Wine grape | nucleus | 78.09 | 74.19 |
| CDX98592 | Canola | nucleus | 62.96 | 73.91 |
| CDY01563 | Canola | nucleus | 62.96 | 73.91 |
| Bra012570.1-P | Field mustard | nucleus | 62.35 | 73.19 |
| AT4G18890.1 | Thale cress | nucleus | 63.89 | 72.89 |
| Bra013359.1-P | Field mustard | nucleus | 62.04 | 72.83 |
| CDX78903 | Canola | nucleus | 62.04 | 72.83 |
| Solyc07g062260.2.1 | Tomato | nucleus | 67.9 | 69.84 |
| CDX99414 | Canola | nucleus | 61.73 | 64.94 |
| Solyc02g063010.2.1 | Tomato | nucleus | 48.46 | 49.22 |
| Solyc04g079980.2.1 | Tomato | nucleus | 42.9 | 42.51 |
| Solyc12g089040.1.1 | Tomato | nucleus | 43.52 | 42.34 |
| Solyc10g076390.1.1 | Tomato | cytosol, nucleus, plastid | 15.43 | 27.78 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | UniProt:K4B8H4 |
| PFAM:PF05687 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF10 | EnsemblPlantsGene:Solyc02g071990.2 | EnsemblPlants:Solyc02g071990.2.1 | UniParc:UPI00027691E9 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:41313401..41318179
Molecular Weight (calculated)
34910.7 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.606
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG WIVEEDGTTY RKGCKPVTRI DIGGSVSVSS SSYQLSPGAS
101: YNPSPVSSSI PSPVSSHYVA NVQNNSDPNS LIPWLKNLSS GSSPSLSNFP HHLCIPGGSI SAPVTPPLSS PTASTPRMND NWENPTANST WIQQHYPFLP
201: SSTPPSPGRQ TPPDSGWLSG VQTPQDGPSS PTFSLVSSNP FGFKEPLSNG GSRMWTPGQS GTCSPAVGPC MDQTADVPMS DAISAEFAFG SNMKGVVKPW
301: EGERIHEECI SDDLELTLGN SSTR
101: YNPSPVSSSI PSPVSSHYVA NVQNNSDPNS LIPWLKNLSS GSSPSLSNFP HHLCIPGGSI SAPVTPPLSS PTASTPRMND NWENPTANST WIQQHYPFLP
201: SSTPPSPGRQ TPPDSGWLSG VQTPQDGPSS PTFSLVSSNP FGFKEPLSNG GSRMWTPGQS GTCSPAVGPC MDQTADVPMS DAISAEFAFG SNMKGVVKPW
301: EGERIHEECI SDDLELTLGN SSTR
001: MTSGTRMPTW RERENNKRRE RRRRAIAAKI FTGLRMYGNY ELPKHCDNNE VLKALCNEAG WIVEPDGTTY RKGCSRPVER MEIGGGSATA SPCSSYQPSP
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR
101: CASYNPSPGS SNFMSPASSS FANLTSGDGQ SLIPWLKHLS TTSSSSASSS SRLPNYLYIP GGSISAPVTP PLSSPTARTP RMNTDWQQLN NSFFVSSTPP
201: SPTRQIIPDS EWFSGIQLAQ SVPASPTFSL VSQNPFGFKE EAASAAGGGG GSRMWTPGQS GTCSPAIPPG ADQTADVPMS EAVAPPEFAF GSNTNGLVKA
301: WEGERIHEES GSDDLELTLG NSSTR
Arabidopsis Description
BEH4BES1/BZR1 homolog protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV88]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.