Factsheet for Solyc02g063010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011470	Potato	nucleus	96.55	96.55
VIT_04s0023g01250.t01	Wine grape	nucleus	74.29	75.0
GSMUA_Achr7P26010_001	Banana	nucleus	62.7	69.44
KRH28616	Soybean	nucleus	67.4	69.35
KRH76864	Soybean	nucleus	66.46	68.83
Bra011706.1-P	Field mustard	nucleus	65.2	68.65
CDX75598	Canola	nucleus	65.2	68.65
CDX72603	Canola	nucleus	65.52	68.52
GSMUA_Achr3P29980_001	Banana	nucleus	63.95	68.23
GSMUA_Achr8P31150_001	Banana	nucleus	62.7	67.8
CDX69246	Canola	nucleus	64.26	67.66
GSMUA_Achr2P06600_001	Banana	nucleus	56.74	67.54
CDY62653	Canola	nucleus	64.58	66.67
Bra017782.1-P	Field mustard	nucleus	65.2	66.45
Os07t0580500-01	Rice	nucleus	61.44	65.77
AT3G50750.1	Thale cress	nucleus	55.8	64.49
CDY64371	Canola	nucleus	57.05	63.86
CDX90690	Canola	nucleus	57.05	63.86
Bra012891.1-P	Field mustard	nucleus	57.05	63.86
Zm00001d021927_P001	Maize	nucleus	60.81	61.2
AT4G36780.1	Thale cress	nucleus	50.78	61.13
TraesCS2D01G199900.1	Wheat	nucleus	59.56	60.7
TraesCS2A01G187800.1	Wheat	nucleus	59.25	60.38
TraesCS2B01G219300.1	Wheat	nucleus	58.93	60.06
Solyc04g079980.2.1	Tomato	nucleus	61.44	59.94
Zm00001d006677_P001	Maize	nucleus	60.19	59.26
EER99604	Sorghum	nucleus, plastid	61.76	58.63
Solyc12g089040.1.1	Tomato	nucleus	59.87	57.36
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	45.77	52.14
Solyc02g071990.2.1	Tomato	nucleus	49.22	48.46
Solyc03g005990.2.1	Tomato	nucleus	48.9	48.3
Solyc07g062260.2.1	Tomato	nucleus	45.14	45.71
Solyc10g076390.1.1	Tomato	cytosol, nucleus, plastid	15.67	27.78

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	InterPro:BES1_N	InterPro:BZR	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	UniProt:K4B6I9
PFAM:PF05687	PANTHER:PTHR31506	PANTHER:PTHR31506:SF6	EnsemblPlantsGene:Solyc02g063010.2	EnsemblPlants:Solyc02g063010.2.1	UniParc:UPI0001CAC38E
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:35030416..35032639

Molecular Weight (calculated)

34476.6 Da

IEP (calculated)

9.730

GRAVY (calculated)

-0.516

Length

319 amino acids

Sequence
(BLAST)

001: MTAGTGGGGS SGRLPTWKER ENNKRRERRR RAIAAKIFTG LRTQGNFKLP KHCDNNEVLK ALCIEAGWIV EDDGTTYRKG HRPPPIENGC VSMNISASSS
101: IQPSPMSSSF PSPVPSYHAS PTSSSFPSPS RCDGNPSSYI LPFLHNLASI PSTLPPLRIS NSAPVTPPLS SPTRRSKPPK PLWESLSRVP LNSFQHPLFA
201: ASAPSSPTRR RYSKPATIPE CDESDAASVE SARWVSFQTV AAPTSPTFNL VKPLPQQNIL LDALSGHGMV GWGETAAQKG HGAEFDFESC KVKAWEGERI
301: HEVAVDDLEL TLGSAKARA

Best Arabidopsis Sequence Match ( AT1G19350.3 )
(BLAST)

001: MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV
101: VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV
201: SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV
301: KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL GNGKAHS

Arabidopsis Description

BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.