Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091592 | Potato | cytosol, nucleus, plastid | 95.0 | 93.96 |
| GSMUA_Achr7P13230_001 | Banana | nucleus, plastid | 37.78 | 46.58 |
| HORVU3Hr1G022940.3 | Barley | plastid | 33.33 | 36.14 |
| Zm00001d039635_P001 | Maize | nucleus | 32.78 | 34.5 |
| TraesCS3D01G125100.1 | Wheat | nucleus | 33.33 | 33.71 |
| TraesCS3B01G142600.1 | Wheat | nucleus | 33.89 | 33.52 |
| TraesCS3A01G123500.1 | Wheat | cytosol, nucleus, plastid | 32.78 | 31.89 |
| OQU86218 | Sorghum | nucleus | 33.33 | 31.58 |
| Os01t0176900-00 | Rice | cytosol | 33.89 | 20.07 |
| Solyc12g089040.1.1 | Tomato | nucleus | 30.56 | 16.52 |
| Solyc04g079980.2.1 | Tomato | nucleus | 30.0 | 16.51 |
| Solyc07g062260.2.1 | Tomato | nucleus | 27.78 | 15.87 |
| Solyc02g063010.2.1 | Tomato | nucleus | 27.78 | 15.67 |
| Solyc03g005990.2.1 | Tomato | nucleus | 27.78 | 15.48 |
| Solyc02g071990.2.1 | Tomato | nucleus | 27.78 | 15.43 |
Protein Annotations
| MapMan:11.3.2.4 | MapMan:15.5.39 | InterPro:BES1_N | InterPro:BZR | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | UniProt:K4D1Y1 |
| PFAM:PF05687 | PANTHER:PTHR31506 | PANTHER:PTHR31506:SF9 | EnsemblPlantsGene:Solyc10g076390.1 | EnsemblPlants:Solyc10g076390.1.1 | UniParc:UPI0002769D84 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:59363764..59364788
Molecular Weight (calculated)
20390.1 Da
IEP (calculated)
8.583
GRAVY (calculated)
-0.941
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEDKKISGV RGCIKTSRGP WLVHRTAKDG SVVTRFRYPS DRERQKNKQR EKNRRRVAHK IFAGLRAHGN YKLPKHADTN DLLMALCKEA GWHVEEDGTI
101: KGKDPVKDLP RLIDVDSAQV SMEDQTKEGD YCKCEDQIKN GEYYCKCEVD MNNVETEKGR PEGSLTSSAF DVNLTLSLSS
101: KGKDPVKDLP RLIDVDSAQV SMEDQTKEGD YCKCEDQIKN GEYYCKCEVD MNNVETEKGR PEGSLTSSAF DVNLTLSLSS
001: MTASGGGSTA ATGRMPTWKE RENNKKRERR RRAIAAKIFT GLRSQGNYKL PKHCDNNEVL KALCLEAGWI VHEDGTTYRK GSRPTETTVP CSSIQLSPQS
101: SAFQSPIPSY QASPSSSSYP SPTRFDPNQS STYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRRSNP RLPRWQSSNF PVSAPSSPTR RLHHYTSIPE
201: CDESDVSTVD SCRWGNFQSV NVSQTCPPSP TFNLVGKSVS SVGVDVSVKP WEGEKIHDVG IDDLELTLGH NTKGRG
101: SAFQSPIPSY QASPSSSSYP SPTRFDPNQS STYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRRSNP RLPRWQSSNF PVSAPSSPTR RLHHYTSIPE
201: CDESDVSTVD SCRWGNFQSV NVSQTCPPSP TFNLVGKSVS SVGVDVSVKP WEGEKIHDVG IDDLELTLGH NTKGRG
Arabidopsis Description
BEH1BEH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA20]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.