CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28616	Soybean	nucleus	95.78	95.16
VIT_04s0023g01250.t01	Wine grape	nucleus	75.0	73.1
GSMUA_Achr7P26010_001	Banana	nucleus	65.58	70.14
Bra011706.1-P	Field mustard	nucleus	67.21	68.32
CDX75598	Canola	nucleus	67.21	68.32
CDX69246	Canola	nucleus	66.56	67.66
CDX72603	Canola	nucleus	66.56	67.21
CDY62653	Canola	nucleus	67.21	66.99
GSMUA_Achr2P06600_001	Banana	nucleus	58.12	66.79
AT3G50750.1	Thale cress	nucleus	59.74	66.67
Solyc02g063010.2.1	Tomato	nucleus	68.83	66.46
PGSC0003DMT400011470	Potato	nucleus	68.83	66.46
Bra017782.1-P	Field mustard	nucleus	67.53	66.45
CDX90690	Canola	nucleus	61.36	66.32
CDY64371	Canola	nucleus	61.36	66.32
Bra012891.1-P	Field mustard	nucleus	61.36	66.32
Os07t0580500-01	Rice	nucleus	63.96	66.11
GSMUA_Achr3P29980_001	Banana	nucleus	63.96	65.89
GSMUA_Achr8P31150_001	Banana	nucleus	62.66	65.42
TraesCS2A01G187800.1	Wheat	nucleus	62.66	61.66
AT4G36780.1	Thale cress	nucleus	52.92	61.51
TraesCS2D01G199900.1	Wheat	nucleus	62.34	61.34
TraesCS2B01G219300.1	Wheat	nucleus	62.34	61.34
Zm00001d021927_P001	Maize	nucleus	62.01	60.25
EER99604	Sorghum	nucleus, plastid	64.29	58.93
Zm00001d006677_P001	Maize	nucleus	61.36	58.33
KRH51888	Soybean	nucleus	60.39	58.12
KRH15250	Soybean	nucleus	58.12	57.56
KRH61201	Soybean	nucleus	59.74	57.5
KRH05791	Soybean	nucleus	57.79	57.23
KRH48585	Soybean	cytosol	31.17	53.93
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	46.75	51.43
KRH21914	Soybean	nucleus	47.4	43.71
KRH21913	Soybean	nucleus	46.1	43.69
KRH27375	Soybean	nucleus	45.45	43.48
KRH27373	Soybean	nucleus	46.75	43.11
KRH16025	Soybean	plastid	31.82	32.78

Protein Annotations

EntrezGene:100812095	MapMan:11.3.2.4	MapMan:15.5.39	EMBL:ACUP02000645	InterPro:BES1_N	InterPro:BZR
EnsemblPlantsGene:GLYMA_01G178000	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	UniProt:I1J8Y4	EnsemblPlants:KRH76864	ProteinID:KRH76864	ProteinID:KRH76864.1
PFAM:PF05687	PANTHER:PTHR31506	PANTHER:PTHR31506:SF6	UniParc:UPI0001CAC38B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:51435225..51436787

Molecular Weight (calculated)

33286.1 Da

IEP (calculated)

9.692

GRAVY (calculated)

-0.598

Length

308 amino acids

Sequence
(BLAST)

001: MTGGGSTGRL PTWKERENNK RRERRRRAIA AKIYTGLRAQ GNYKLPKHCD NNEVLKALCA EAGWIVEEDG TTYRKGCKRP TSEIGGTPLN LSACSSIQAS
101: PQSSSYPSPV PSYHASPTSS SFPSPTRIDG NHPSSFLIPF IRNITSIPAN LPPLRISNSA PVTPPLSSPR SSKRKADFDS LRHPLFATSA PSSPTRRHHV
201: ATSTIPECDE SDASTVDSAS GRWVSFQVQT TMVAAAAAAP PSPTFNLMKP AMQQIAAQEG MQWGSVAERG RGGSDFDFEN GRVKPWEGER IHEVGMDDLE
301: LTLGVGKA

Best Arabidopsis Sequence Match ( AT1G19350.5 )
(BLAST)

001: MTSDGATSTS AAAAAAAMAT RRKPSWRERE NNRRRERRRR AVAAKIYTGL RAQGNYNLPK HCDNNEVLKA LCSEAGWVVE EDGTTYRKGH KPLPGDMAGS
101: SSRATPYSSH NQSPLSSTFD SPILSYQVSP SSSSFPSPSR VGDPHNISTI FPFLRNGGIP SSLPPLRISN SAPVTPPVSS PTSRNPKPLP TWESFTKQSM
201: SMAAKQSMTS LNYPFYAVSA PASPTHHRQF HAPATIPECD ESDSSTVDSG HWISFQKFAQ QQPFSASMVP TSPTFNLVKP APQQLSPNTA AIQEIGQSSE
301: FKFENSQVKP WEGERIHDVA MEDLELTLGN GKAHS

Arabidopsis Description

BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.