CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16025	Soybean	plastid	96.07	57.19
KRH28616	Soybean	nucleus	54.49	31.29
KRH76864	Soybean	nucleus	53.93	31.17
GSMUA_Achr2P06600_001	Banana	nucleus	46.63	30.97
GSMUA_Achr7P26010_001	Banana	nucleus	47.75	29.51
GSMUA_Achr3P29980_001	Banana	nucleus	47.75	28.43
Os07t0580500-01	Rice	nucleus	47.19	28.19
GSMUA_Achr8P31150_001	Banana	nucleus	46.63	28.14
TraesCS2D01G199900.1	Wheat	nucleus	46.07	26.2
TraesCS2B01G219300.1	Wheat	nucleus	46.07	26.2
TraesCS2A01G187800.1	Wheat	nucleus	46.07	26.2
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	41.01	26.07
Zm00001d006677_P001	Maize	nucleus	47.19	25.93
Zm00001d021927_P001	Maize	nucleus	45.51	25.55
KRH15250	Soybean	nucleus	44.38	25.4
KRH05791	Soybean	nucleus	43.82	25.08
EER99604	Sorghum	nucleus, plastid	46.63	24.7
KRH51888	Soybean	nucleus	44.38	24.69
KRH21913	Soybean	nucleus	44.94	24.62
KRH61201	Soybean	nucleus	43.82	24.38
KRH27373	Soybean	nucleus	45.51	24.25
KRH27375	Soybean	nucleus	43.82	24.22
KRH21914	Soybean	nucleus	44.94	23.95

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	EMBL:ACUP02004252	InterPro:ArgoL1	InterPro:BES1_N	InterPro:BZR
EnsemblPlantsGene:GLYMA_07G099100	GO:GO:0003674	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	UniProt:K7L0R7	EnsemblPlants:KRH48585
ProteinID:KRH48585	ProteinID:KRH48585.1	InterPro:PAZ_dom_sf	PFAM:PF05687	PFAM:PF08699	PANTHER:PTHR31506
PANTHER:PTHR31506:SF3	SMART:SM01163	SUPFAM:SSF101690	UniParc:UPI00029682FC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:9347781..9349110

Molecular Weight (calculated)

19786.0 Da

IEP (calculated)

10.385

GRAVY (calculated)

-0.354

Length

178 amino acids

Sequence
(BLAST)

001: MTGGGSTGRL PTWKERENNK RRERRQRAIA AKIYTGLRAQ GNYKLLKHCD NNEVVKALCA EVGWIVEEDG TTYRKGCKRP SASEIEGTTT NIRGGVIGCR
101: GFHSSFRTTQ SGLSLNIDVS TTMIITPGPV VDFLISNQNV RDPFSLDWAK AKRTLKNLMH LKVAIMVLNQ CYIIVGSL

Best Arabidopsis Sequence Match ( AT2G27040.1 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.