CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76864	Soybean	nucleus	95.16	95.78
VIT_04s0023g01250.t01	Wine grape	nucleus	75.81	74.37
GSMUA_Achr7P26010_001	Banana	nucleus	65.16	70.14
Bra011706.1-P	Field mustard	nucleus	66.77	68.32
CDX75598	Canola	nucleus	66.77	68.32
CDX72603	Canola	nucleus	66.77	67.87
CDX69246	Canola	nucleus	66.13	67.66
Solyc02g063010.2.1	Tomato	nucleus	69.35	67.4
PGSC0003DMT400011470	Potato	nucleus	69.03	67.08
CDY62653	Canola	nucleus	66.45	66.67
AT3G50750.1	Thale cress	nucleus	59.35	66.67
GSMUA_Achr2P06600_001	Banana	nucleus	57.42	66.42
Bra017782.1-P	Field mustard	nucleus	66.77	66.13
GSMUA_Achr3P29980_001	Banana	nucleus	63.55	65.89
CDY64371	Canola	nucleus	60.0	65.26
CDX90690	Canola	nucleus	60.0	65.26
Bra012891.1-P	Field mustard	nucleus	60.0	65.26
Os07t0580500-01	Rice	nucleus	62.58	65.1
GSMUA_Achr8P31150_001	Banana	nucleus	61.94	65.08
AT4G36780.1	Thale cress	nucleus	53.23	62.26
TraesCS2A01G187800.1	Wheat	nucleus	61.61	61.02
TraesCS2D01G199900.1	Wheat	nucleus	61.29	60.7
TraesCS2B01G219300.1	Wheat	nucleus	61.29	60.7
Zm00001d021927_P001	Maize	nucleus	60.65	59.31
KRH51888	Soybean	nucleus	60.32	58.44
EER99604	Sorghum	nucleus, plastid	62.9	58.04
KRH15250	Soybean	nucleus	58.06	57.88
KRH61201	Soybean	nucleus	59.68	57.81
Zm00001d006677_P001	Maize	nucleus	60.32	57.72
KRH05791	Soybean	nucleus	57.42	57.23
KRH48585	Soybean	cytosol	31.29	54.49
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	46.77	51.79
KRH21914	Soybean	nucleus	47.42	44.01
KRH21913	Soybean	nucleus	46.13	44.0
KRH27375	Soybean	nucleus	45.48	43.79
KRH27373	Soybean	nucleus	46.77	43.41
KRH16025	Soybean	plastid	32.58	33.78

Protein Annotations

EntrezGene:100795837	MapMan:11.3.2.4	MapMan:15.5.39	EMBL:ACUP02006760	InterPro:BES1_N	InterPro:BZR
EnsemblPlantsGene:GLYMA_11G064300	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	UniProt:K7LND5	EnsemblPlants:KRH28616	ProteinID:KRH28616	ProteinID:KRH28616.1
PFAM:PF05687	PANTHER:PTHR31506	PANTHER:PTHR31506:SF6	UniParc:UPI0001CABBFA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:+:4849799..4851673

Molecular Weight (calculated)

33566.4 Da

IEP (calculated)

9.692

GRAVY (calculated)

-0.586

Length

310 amino acids

Sequence
(BLAST)

001: MTGGGSTGRL PTWKERENNK RRERRRRAIA AKIYTGLRAQ GNYKLPKHCD NNEVLKALCA EAGWIVEEDG TTYRKGCKRP SASEIGGTVA NISACSSIQP
101: SPQSSSYPSP VPSYHASPTS SSFPSPTRID GNHPSSFLIP FIRNITSIPA NLPPLRISNS APVTPPLSSP RSSKRKADFD SLHNASLRHP LFATSAPSSP
201: SRRHHLATST IPECDESDAS TVDSASGRWV SFQVQTTMAA APPSPTFNLM KPAMQQIAAQ EGMLWGSVAE RVRGGSDFDF ENGRVKPWEG ERIHEVGMDD
301: LELTLGVGKA

Best Arabidopsis Sequence Match ( AT1G75080.1 )
(BLAST)

001: MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG
101: TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ
201: SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS
301: EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG

Arabidopsis Description

BZR1Protein BRASSINAZOLE-RESISTANT 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8S307]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.