CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006677_P001	Maize	nucleus	88.69	91.98
Zm00001d021927_P001	Maize	nucleus	86.31	91.48
Os07t0580500-01	Rice	nucleus	80.06	90.27
TraesCS2B01G219300.1	Wheat	nucleus	78.27	84.03
TraesCS2D01G199900.1	Wheat	nucleus	78.27	84.03
TraesCS2A01G187800.1	Wheat	nucleus	77.98	83.71
GSMUA_Achr2P06600_001	Banana	nucleus	57.14	71.64
GSMUA_Achr7P26010_001	Banana	nucleus	60.71	70.83
GSMUA_Achr3P29980_001	Banana	nucleus	61.01	68.56
GSMUA_Achr8P31150_001	Banana	nucleus	59.52	67.8
VIT_04s0023g01250.t01	Wine grape	nucleus	61.61	65.51
HORVU0Hr1G040070.2	Barley	cytosol, mitochondrion	53.57	64.29
KRH76864	Soybean	nucleus	58.93	64.29
KRH28616	Soybean	nucleus	58.04	62.9
PGSC0003DMT400011470	Potato	nucleus	58.63	61.76
Solyc02g063010.2.1	Tomato	nucleus	58.63	61.76
CDX75598	Canola	nucleus	55.65	61.72
Bra011706.1-P	Field mustard	nucleus	55.65	61.72
CDX72603	Canola	nucleus	55.95	61.64
CDX90690	Canola	nucleus	51.79	61.05
CDY62653	Canola	nucleus	55.95	60.84
CDX69246	Canola	nucleus	54.76	60.73
Bra012891.1-P	Field mustard	nucleus	51.49	60.7
Bra017782.1-P	Field mustard	nucleus	56.25	60.38
CDY64371	Canola	nucleus	51.19	60.35
AT3G50750.1	Thale cress	nucleus	49.4	60.14
CDX73140	Canola	nucleus	45.54	59.53
CDY69925	Canola	nucleus, plastid	49.4	58.04
CDY26676	Canola	nucleus, plastid	56.85	57.88
KRH51888	Soybean	nucleus	55.06	57.81
CDY50574	Canola	nucleus, plastid	56.55	57.4
Bra025733.1-P	Field mustard	nucleus, plastid	56.55	57.4
CDX96665	Canola	plastid	56.85	57.36
Bra016508.1-P	Field mustard	plastid	56.55	57.06
KRH15250	Soybean	nucleus	52.68	56.91
PGSC0003DMT400071585	Potato	cytosol, nucleus, peroxisome	46.73	56.88
KRH61201	Soybean	nucleus	54.17	56.88
Bra003772.1-P	Field mustard	nucleus	55.65	56.5
CDX68150	Canola	nucleus	55.65	56.5
CDX83768	Canola	plastid	56.55	56.38
KRH05791	Soybean	nucleus	52.08	56.27
AT1G75080.2	Thale cress	nucleus	56.25	56.25
CDY59466	Canola	nucleus	55.36	55.86
VIT_18s0001g12020.t01	Wine grape	nucleus	50.89	55.7
Bra015868.1-P	Field mustard	nucleus, plastid	51.49	55.1
Solyc04g079980.2.1	Tomato	nucleus	52.68	54.13
AT1G19350.3	Thale cress	nucleus	57.44	54.06
CDX81925	Canola	nucleus	51.79	54.04
PGSC0003DMT400039879	Potato	nucleus, plastid	52.68	53.64
AT4G36780.1	Thale cress	nucleus	41.96	53.21
Solyc12g089040.1.1	Tomato	nucleus	52.38	52.85
CDY21670	Canola	nucleus	53.87	46.89
Bra031077.1-P	Field mustard	nucleus	53.87	46.89
KRH48585	Soybean	cytosol	24.7	46.63
EES00101	Sorghum	nucleus	45.54	43.97
EER88499	Sorghum	nucleus, plastid	44.64	42.13
CDY37261	Canola	mitochondrion	12.5	39.25
EER95543	Sorghum	nucleus	38.1	31.07
KRH16025	Soybean	plastid	25.3	28.43
KXG29878	Sorghum	nucleus	30.36	27.2
KXG29877	Sorghum	nucleus	21.13	25.82
OQU86218	Sorghum	nucleus	14.58	25.79
OQU84681	Sorghum	nucleus	29.46	24.81

Protein Annotations

MapMan:11.3.2.4	MapMan:15.5.39	EntrezGene:8058354	InterPro:BES1_N	InterPro:BZR	UniProt:C5XCF5
EnsemblPlants:EER99604	ProteinID:EER99604	ProteinID:EER99604.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009741	GO:GO:0009742	GO:GO:0009987	PFAM:PF05687	PANTHER:PTHR31506
PANTHER:PTHR31506:SF3	EnsemblPlantsGene:SORBI_3002G353200	unigene:Sbi.16663	UniParc:UPI0001A83C19	RefSeq:XP_002463083.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:71635214..71637226

Molecular Weight (calculated)

35273.2 Da

IEP (calculated)

8.831

GRAVY (calculated)

-0.471

Length

336 amino acids

Sequence
(BLAST)

001: MTSGAAAAAA AAGALGRTPT WKERENNKRR ERRRRAIAAK IFTGLRALGN YKLPKHCDNN EVLKALCREA GWVVEDDGTT YRKGCKPPPG MMSPCSSSQL
101: LSAPSSSFPS PVPSYHASPA SSSFPSPTRL DHSSGSNHHH HHNPGPTAAA AAAAASSLLP FLRSLPNLPP LRVSSSAPVT PPLSSPTAAS RPPTKVRKPD
201: WDAAVADPFR HPFFAVSAPA SPTRARRREH PDTIPECDES DVCSTVDSGR WISFQVGAAT TAPASPTYNL VHPAGGGASA SNSMELDGMA AADIGGRGGG
301: PAEFEFDKGR VTPWEGERIH EVAAEELELT LGVGAK

Best Arabidopsis Sequence Match ( AT1G19350.3 )
(BLAST)

001: MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV
101: VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV
201: SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV
301: KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL GNGKAHS

Arabidopsis Description

BES1Brassinosteroid signaling positive regulator (BZR1) family protein [Source:UniProtKB/TrEMBL;Acc:F4HP45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.