CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29878	Sorghum	nucleus	75.27	55.2
Zm00001d053543_P001	Maize	nucleus	53.09	53.87
OQU84681	Sorghum	nucleus	71.27	49.12
Zm00001d016231_P001	Maize	nucleus	61.09	46.41
EER95543	Sorghum	nucleus	35.64	23.79
EER88499	Sorghum	nucleus, plastid	28.0	21.63
EES00101	Sorghum	nucleus	27.27	21.55
EER99604	Sorghum	nucleus, plastid	25.82	21.13
OQU86218	Sorghum	nucleus	11.27	16.32

Protein Annotations

MapMan:35.2	UniProt:A0A194YNV5	InterPro:BZR	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	EnsemblPlants:KXG29877	ProteinID:KXG29877
ProteinID:KXG29877.1	PANTHER:PTHR31506	PANTHER:PTHR31506:SF2	EnsemblPlantsGene:SORBI_3004G102600	UniParc:UPI0007F22594	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:9610540..9611889

Molecular Weight (calculated)

28334.8 Da

IEP (calculated)

10.338

GRAVY (calculated)

-0.799

Length

275 amino acids

Sequence
(BLAST)

001: MVTKGVGAGG SGGGDDAWAR AGDENGNGSG NGKKAENNRR RERRRRAIVS RIVADGGTTY RKGPKPPAGD DQHMADVGGS SAPVNPPGGA SNSLTRPSSP
101: SGIALGGGGS GGADPVPAWL KNLSKQLSDN SYPNFFASSS NSKAPDGSPP SSPPRLRKKA RYSSPPPATP PPSPTRDPNN DVLPPSWSTT TPLMMSRPVP
201: DPVTLLAANK APAFVASGRG GALLSPLGFY FRRSSGEQAA AGAREEEVIM TEKNPDEEEG LELTLGNAET RKDRA

Best Arabidopsis Sequence Match ( AT4G36780.1 )
(BLAST)

001: MAAGGGGGGG GSSSGRTPTW KERENNKKRE RRRRAITAKI YSGLRAQGNY KLPKHCDNNE VLKALCLEAG WIVEDDGTTY RKGFKPPASD ISGTPTNFST
101: NSSIQPSPQS SAFPSPAPSY HGSPVSSSFP SPSRYDGNPS SYLLLPFLHN IASSIPANLP PLRISNSAPV TPPLSSPTSR GSKRKLTSEQ LPNGGSLHVL
201: RHPLFAISAP SRLVVLVTKR HLQYRNVMSP RRIRSRIQEG GSISNLLLLL HQHLTLFSKL LWPLI

Arabidopsis Description

BEH2BES1/BZR1 homolog 2 [Source:TAIR;Acc:AT4G36780]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.