Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | extracellular | 87.14 | 91.04 |
| GSMUA_Achr7P14630_001 | Banana | vacuole | 87.14 | 28.11 |
| GSMUA_Achr2P20070_001 | Banana | endoplasmic reticulum, extracellular | 44.29 | 14.16 |
| VIT_01s0150g00060.t01 | Wine grape | cytosol | 10.0 | 4.4 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P14580_001 | EnsemblPlants:GSMUA_Achr7T14580_001 | EnsemblPlantsGene:GSMUA_Achr7G14580_001 | Gene3D:3.20.80.10 | InterPro:IPR011256 | InterPro:Reg_factor_effector_dom_sf |
| InterPro:SOUL_haem-bd | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF36 | PFAM:PF04832 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF55136 | UniParc:UPI000294944C | UniProt:M0THJ5 | MapMan:35.2 | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G14580_001]
Coordinates
chr7:+:11728026..11728238
Molecular Weight (calculated)
8118.8 Da
IEP (calculated)
7.691
GRAVY (calculated)
-0.127
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MNRPRGFTLL AVVPLLLVRL YTPSAIESPQ YTVVHSESDF EVRLYRESVW MSAPTDEISF EKATKFGFHR
001: METGLNILKL SLCVSLVVVG SYAQAPAPWN PSNGFRPGTC DHYECPTYKL VEAGYGFEIR MYDAALWIST SPIPSLSMTQ ATKTGFRRLN RYIEGDNKSN
101: VKMNMTAPVI AQATPGRSVY TVSLYLPKKN QQNPPQADDL HVRSTKPTYV AVRQIGGYVS NNVAKDEAAA LMESLRDSNW ILPIEKSKGK LPAYFLAVYN
201: PPSHTTARVI NEIMVPFNM
101: VKMNMTAPVI AQATPGRSVY TVSLYLPKKN QQNPPQADDL HVRSTKPTYV AVRQIGGYVS NNVAKDEAAA LMESLRDSNW ILPIEKSKGK LPAYFLAVYN
201: PPSHTTARVI NEIMVPFNM
Arabidopsis Description
AT1G78460 protein [Source:UniProtKB/TrEMBL;Acc:Q9SYN5]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.