Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P14580_001 | Banana | endoplasmic reticulum, extracellular | 91.04 | 87.14 |
| GSMUA_Achr7P14630_001 | Banana | vacuole | 95.52 | 29.49 |
| GSMUA_Achr2P20070_001 | Banana | endoplasmic reticulum, extracellular | 44.78 | 13.7 |
| VIT_01s0150g00060.t01 | Wine grape | cytosol | 11.94 | 5.03 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP26260_001 | EnsemblPlants:GSMUA_AchrUn_randomT26260_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG26260_001 | Gene3D:3.20.80.10 | InterPro:IPR011256 | InterPro:Reg_factor_effector_dom_sf |
| InterPro:SOUL_haem-bd | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF36 | PFAM:PF04832 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF55136 | UniParc:UPI000295ECE6 | UniProt:M0UCI4 | MapMan:35.2 | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG26260_001]
Coordinates
chrchrUn_random:-:129058744..129058947
Molecular Weight (calculated)
7718.2 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.054
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MNRPRGFTLL AVVPLLLVVT SAIESPQYTV VHSESDFEVR LYRESVWMST PTDEISFEKA TKFGFHR
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.