Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P20970_001 | Banana | nucleus | 38.02 | 38.82 |
| CDX67884 | Canola | nucleus | 35.81 | 37.09 |
| HORVU5Hr1G086470.1 | Barley | plastid | 19.56 | 16.99 |
| GSMUA_Achr8P10850_001 | Banana | cytosol | 1.65 | 7.06 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P10840_001 | EnsemblPlants:GSMUA_Achr8T10840_001 | EnsemblPlantsGene:GSMUA_Achr8G10840_001 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR22938 |
| PANTHER:PTHR22938:SF6 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | TMHMM:TMhelix | UniParc:UPI0002965F7C |
| UniProt:M0TPD7 | MapMan:15.5.15 | : | : | : | : |
Description
Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G10840_001]
Coordinates
chr8:-:7765847..7769517
Molecular Weight (calculated)
80520.2 Da
IEP (calculated)
9.509
GRAVY (calculated)
-0.685
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPFSRALI PLALANIYAV LKLLQYLIFR FSHSCFHQDT NSLAIMLIVG ACVRMYLIWQ HVSRGSLLMF TSNILCNVSA FFCVFAGSLE NGTFKQVFIC
101: EQKLYTRSQL NQHKSTGDSE VDGNESERGG FMGHPTCEFC RNRFYGDNEL YMHMSTEHYT CHICQRQHPG QYDYFRDYND LEMHFRQEHF LCENEACLEK
201: KFVVFQTESE MKRHNTLEHG GHMSRSKRNA ALRIPTSFRY RRNEQEQRRG RGHGFRPDPS GDQLSMAIQA SLEMAVADGR FQDSSFGSRM NAEHGETRRA
301: DAVRNSSEVS NVNAGSEAPL KPSSRYAQAL SQNSRNAVKL REESFPPLPG ATSKPKPIHG SESSSTNTFA ARIQRNRGSV VVNSAPSRPP EYHEIFPSAS
401: QLRATPNYGS TSSTSTSSQL GGKPIRENAH RSPSSSSTAY NLGTVNRMKH SASAPNLAEG SFFNQAVPGV SSGAKGEEPL TQSKQSLTVT GDVYTANKSL
501: VERIRAALGM DDDMYGAFKN LSSEYRQGQI NTWEYLSYVE QFGLSHLVPE LARLCPDGQK QKELIDTYNA NLQNKSLQEN DGSSRGGKGK GKAVARAQSS
601: AKDSLADDFL ASVRKLQLNQ KPQEDGVEVL SKGGYRVTKD TFQVSAKQVH GNSTSGKQRK KTSKFHRVRL GDSSATALLD LSRRDTSPEP TENRTAGDGP
701: PDGVPVRGVW RSGGAHRLFA NSNRNA
101: EQKLYTRSQL NQHKSTGDSE VDGNESERGG FMGHPTCEFC RNRFYGDNEL YMHMSTEHYT CHICQRQHPG QYDYFRDYND LEMHFRQEHF LCENEACLEK
201: KFVVFQTESE MKRHNTLEHG GHMSRSKRNA ALRIPTSFRY RRNEQEQRRG RGHGFRPDPS GDQLSMAIQA SLEMAVADGR FQDSSFGSRM NAEHGETRRA
301: DAVRNSSEVS NVNAGSEAPL KPSSRYAQAL SQNSRNAVKL REESFPPLPG ATSKPKPIHG SESSSTNTFA ARIQRNRGSV VVNSAPSRPP EYHEIFPSAS
401: QLRATPNYGS TSSTSTSSQL GGKPIRENAH RSPSSSSTAY NLGTVNRMKH SASAPNLAEG SFFNQAVPGV SSGAKGEEPL TQSKQSLTVT GDVYTANKSL
501: VERIRAALGM DDDMYGAFKN LSSEYRQGQI NTWEYLSYVE QFGLSHLVPE LARLCPDGQK QKELIDTYNA NLQNKSLQEN DGSSRGGKGK GKAVARAQSS
601: AKDSLADDFL ASVRKLQLNQ KPQEDGVEVL SKGGYRVTKD TFQVSAKQVH GNSTSGKQRK KTSKFHRVRL GDSSATALLD LSRRDTSPEP TENRTAGDGP
701: PDGVPVRGVW RSGGAHRLFA NSNRNA
001: MDDSCAVCAD NLEWVAYGSC GHREVCSTCV VRLRFVLDDP RCCICKTESP IVFVTKALGD YTRTINDFST FPSAPREGRV GAFWYHEDTQ AFFDDLDQYR
101: MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC
201: EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS
301: FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG
401: GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR
501: VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN
601: ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD
701: TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR
801: GVWRKGGANL FS
101: MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC
201: EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS
301: FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG
401: GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR
501: VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN
601: ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD
701: TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR
801: GVWRKGGANL FS
Arabidopsis Description
At3g62240 [Source:UniProtKB/TrEMBL;Acc:Q9M1Q0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.