Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G032900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus | 33.01 | 30.77 |
| HORVU3Hr1G034270.3 | Barley | nucleus, plastid | 19.38 | 20.98 |
| GSMUA_Achr8P10840_001 | Banana | extracellular, golgi | 16.99 | 19.56 |
| CDX67884 | Canola | nucleus | 14.11 | 16.83 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G086470.1 | EnsemblPlantsGene:HORVU5Hr1G086470 | ncoils:Coil | PANTHER:PTHR22938 | PANTHER:PTHR22938:SF7 | SEG:seg |
| UniParc:UPI000B46EDFD | UniProt:A0A287S4E1 | MapMan:15.5.15 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:576259603..576263104
Molecular Weight (calculated)
87817.6 Da
IEP (calculated)
9.518
GRAVY (calculated)
-0.636
Length
836 amino acids
Sequence
(BLAST)
(BLAST)
001: MIISGTTMNW RCIFVETTSS VKMMPAWPRS LLSSRATPRS TGTMLWSTAG GCLVPRGXXX XXXNAALQIP TSFMYQRNEQ DQRRGRGRGR SAHFDRHDSD
101: FSLPVDGSAA ADHGLGSRLD SARGSTMLGD ESLFPPLPGS SNKCSASTQQ GLQGLSRETL ASRLQKGTMK VLYSGRPRTA ENPEIVPLVS TSTQTCPTPE
201: PERNGSATAE HGLGSRVDSV TGPLQSLSVS SASSVRSLGN GRVLEQLSFP PLQGQDIRGA RMDDVPDETS LPPLSEHQSR YELALNRSSR GSERLGDEPL
301: FPPLSGSSNK GSASTQQGLQ DFAKNTLASG LQQPRKGTVE VLNSGRPQTA ENPEIVPHVS TSRQTCPTPE RGRCGSATAE HDLGSRVDSV AGPLQLSSVS
401: SASSGGSLGH GRVLEQLSFP PLLDQDIPDA RMDAVPDETS FPPLSERQAK HALAVNQSSR GSARLADESL FPSLPGLSNK GSASTQQGLQ SFAENTFASR
501: LQQPRKGAMK VPSSSRSQTA ENPEIVPLVS TSPEKWPTPA DQGLHLSGSS QLRVATRSTR DNGPMPPASS XXXXXXXXXS AWNPRAPNKM KHSVSTPNFV
601: SAQASSKAYG NKKQPPPQSS QPSPVAEDVR QANNSLVERM HAALGMDDDK FSAFKEIACE YRHGVIGTSE YLSYVEQFGI SHLVPEMARL LPDPLKRKEL
701: ADAYYTNTRF KSLRENGSCE TTTLKEKLLQ EGEAAVLSKD GYRSSKERIP LSAGGSSSGA NMGLDGDPVA ISKASGGSSS NNNSKQSKKT SRFLRARLGD
801: NSLAMLDFSH PDDVNPERNV WKNGAAQKLF TGNAKK
101: FSLPVDGSAA ADHGLGSRLD SARGSTMLGD ESLFPPLPGS SNKCSASTQQ GLQGLSRETL ASRLQKGTMK VLYSGRPRTA ENPEIVPLVS TSTQTCPTPE
201: PERNGSATAE HGLGSRVDSV TGPLQSLSVS SASSVRSLGN GRVLEQLSFP PLQGQDIRGA RMDDVPDETS LPPLSEHQSR YELALNRSSR GSERLGDEPL
301: FPPLSGSSNK GSASTQQGLQ DFAKNTLASG LQQPRKGTVE VLNSGRPQTA ENPEIVPHVS TSRQTCPTPE RGRCGSATAE HDLGSRVDSV AGPLQLSSVS
401: SASSGGSLGH GRVLEQLSFP PLLDQDIPDA RMDAVPDETS FPPLSERQAK HALAVNQSSR GSARLADESL FPSLPGLSNK GSASTQQGLQ SFAENTFASR
501: LQQPRKGAMK VPSSSRSQTA ENPEIVPLVS TSPEKWPTPA DQGLHLSGSS QLRVATRSTR DNGPMPPASS XXXXXXXXXS AWNPRAPNKM KHSVSTPNFV
601: SAQASSKAYG NKKQPPPQSS QPSPVAEDVR QANNSLVERM HAALGMDDDK FSAFKEIACE YRHGVIGTSE YLSYVEQFGI SHLVPEMARL LPDPLKRKEL
701: ADAYYTNTRF KSLRENGSCE TTTLKEKLLQ EGEAAVLSKD GYRSSKERIP LSAGGSSSGA NMGLDGDPVA ISKASGGSSS NNNSKQSKKT SRFLRARLGD
801: NSLAMLDFSH PDDVNPERNV WKNGAAQKLF TGNAKK
001: MDDSCAVCAE NLEWVGYGSC GHREVCSTCV VRLRFILNDR RCCICKTECP VVFVTKALGD YTKTISDFST TFPSVPKEGR VGSFWLSCNL CNDTNKTRPK
101: KEPNHCVRFK SVEHLKDHLN HQHKLHMCSL CLVGRKVFIC EQKLFTKGQL NQHISSGDSE VDGSESERGG FTGHPMCEFC KRPFYGDNEL YTHMSREHYT
201: CHICQRLKPG QYEYYGNYDD LEVHFRSDHF LCEDETCLAK KFIVFQIEAE LKRHNAIDHG GRMSRSQQNA SLQIQASFQY PNSRRGRRRS SLREPNLVLL
301: ESQASYAFND DNNLPQHVGR SGNSRLGESS FPPLSVQANQ GQSRFGQNSE SLVSNTTTTR QRHRANQGQS RFGQNSESLV SNTTTTRQRH QTNRSATSGS
401: SQAWPALNRG PAEISITSRV QSSGASAQSQ SRHHDRVEST RTLASAVPQD ARTTVGGCSS GSSLSSANAT KRNNHHSSST PKMSETRSLA QPSHSDSPQI
501: SAVKNRRSSS TSANAGNIQV AQGVSDVQSD NKSLVEKIHA SLGHDEELFM AFKNTSGKYR HGSIDARTYL EYVKGYGLSH LVLDMARLCP DPQRQKELID
601: THNACLKGGN KGKAVKVESS SDSKGDRFVD TVRKLQFSDK SQDKDKDKDA YRSDKGKTKV TTLVNSSSAG VGLGDTGKQP KKTSKFLRTR LGEKSMAAVL
701: DLRNSNPEPE PEPKNDNSKR SQNSPGGLPL RGAWKRGSAK LFV
101: KEPNHCVRFK SVEHLKDHLN HQHKLHMCSL CLVGRKVFIC EQKLFTKGQL NQHISSGDSE VDGSESERGG FTGHPMCEFC KRPFYGDNEL YTHMSREHYT
201: CHICQRLKPG QYEYYGNYDD LEVHFRSDHF LCEDETCLAK KFIVFQIEAE LKRHNAIDHG GRMSRSQQNA SLQIQASFQY PNSRRGRRRS SLREPNLVLL
301: ESQASYAFND DNNLPQHVGR SGNSRLGESS FPPLSVQANQ GQSRFGQNSE SLVSNTTTTR QRHRANQGQS RFGQNSESLV SNTTTTRQRH QTNRSATSGS
401: SQAWPALNRG PAEISITSRV QSSGASAQSQ SRHHDRVEST RTLASAVPQD ARTTVGGCSS GSSLSSANAT KRNNHHSSST PKMSETRSLA QPSHSDSPQI
501: SAVKNRRSSS TSANAGNIQV AQGVSDVQSD NKSLVEKIHA SLGHDEELFM AFKNTSGKYR HGSIDARTYL EYVKGYGLSH LVLDMARLCP DPQRQKELID
601: THNACLKGGN KGKAVKVESS SDSKGDRFVD TVRKLQFSDK SQDKDKDKDA YRSDKGKTKV TTLVNSSSAG VGLGDTGKQP KKTSKFLRTR LGEKSMAAVL
701: DLRNSNPEPE PEPKNDNSKR SQNSPGGLPL RGAWKRGSAK LFV
Arabidopsis Description
Zinc ion binding/nucleic acid binding protein [Source:UniProtKB/TrEMBL;Acc:F4IK69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.