Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G201500.1 | Wheat | nucleus | 76.94 | 83.9 |
| TraesCS3D01G176900.1 | Wheat | nucleus | 76.42 | 83.1 |
| TraesCS3A01G164600.4 | Wheat | nucleus | 75.78 | 74.52 |
| Os01t0251200-01 | Rice | extracellular | 50.26 | 52.65 |
| Zm00001d048205_P003 | Maize | nucleus | 36.27 | 46.9 |
| Zm00001d048207_P001 | Maize | nucleus | 33.03 | 44.12 |
| KXG39981 | Sorghum | nucleus | 45.34 | 41.92 |
| Zm00001d028020_P001 | Maize | nucleus | 44.3 | 40.57 |
| HORVU1Hr1G032900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus | 46.63 | 40.13 |
| CDY37785 | Canola | nucleus | 32.12 | 39.62 |
| Bra004478.1-P | Field mustard | nucleus | 32.12 | 37.07 |
| CDX80080 | Canola | nucleus | 31.87 | 36.83 |
| VIT_07s0005g02190.t01 | Wine grape | nucleus | 38.21 | 36.06 |
| AT2G47090.1 | Thale cress | nucleus | 35.49 | 35.77 |
| Bra003493.1-P | Field mustard | nucleus | 36.66 | 35.16 |
| AT3G62240.1 | Thale cress | nucleus | 36.92 | 35.1 |
| KRH68317 | Soybean | nucleus | 37.56 | 34.86 |
| KRG96582 | Soybean | nucleus | 36.92 | 34.21 |
| Solyc01g068390.2.1 | Tomato | nucleus | 38.21 | 33.56 |
| PGSC0003DMT400046261 | Potato | nucleus | 38.21 | 33.52 |
| HORVU5Hr1G086470.1 | Barley | plastid | 20.98 | 19.38 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G034270.3 | EnsemblPlantsGene:HORVU3Hr1G034270 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR001841 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | InterPro:Znf_RING | ncoils:Coil | PANTHER:PTHR22938 | PANTHER:PTHR22938:SF7 |
| PFscan:PS50089 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | UniParc:UPI000B475232 | UniProt:A0A287KQD6 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:185512264..185517368
Molecular Weight (calculated)
85132.2 Da
IEP (calculated)
8.798
GRAVY (calculated)
-0.677
Length
772 amino acids
Sequence
(BLAST)
(BLAST)
001: SSYRTGQGSP PTPTLWRRAL DRTPPPPSPP LRCARFSNQQ IPPPPPRPAP PPPAPPSAVE LDMDDACAVC AERLEWVAYG ACGHREVCSA CVTRLRFVLR
101: DQRCCLCMTH CPAVFATKVS TARTKAIGDL SALPAAAGEG KAGEYWYHEA TQAWFDDADH YRMVRAMCRI SCTVCQSSGN KGKKGSKSSK AKHKTKFDSI
201: EQLKAHLFNK HCLYMCDLCL DGRKVFACEQ KLYTRPQLNQ HIKTGDSEVD GSEVERRGFV GHPMCKFCKS PFYAETDLDT HMTREHYSCH ICQRQHGGQD
301: DYFRNYDDLE MHFRRDHFFC EDRECLEKKF IVFQSEAELK RHNAVEHRKR MPHAQKNSAL QTPTSSRDWS ELDQSNSRGR RHNACLSTGS VDNTLLSVQN
401: SIANMGRGSG NQVAAVVSPL RSSSGHSSQA GQSSGTNHVW QQSHFPPLSR QEVPDARMGS CLQEASSPPI SGQSGYTPVV SRSSRTAARA MDVEFPPLSG
501: SNNRTAASTE QGLRKVAENT HAFGLRQQSN GIVHTHHSAQ HWSLENTDLI PSGSSHSPSW PTPNTNPHIS GSLSLPFAGN GRQETPVSRQ VLCSADDVRA
601: ANNSLVERMQ AALGMDRDRY SMFKEISGEY RQGVIDASKY LSYVEQFGLS HLVLEMSRLL PDPQKQKELA DAYYANLRLT SLQGNGGGGA VCSKDCTRKN
701: KGKGKLPAAA QDSLEDKLLS AASKLQPQVG GSRVLLREGC GAADGPLQEP RWPVKGAWQN RGGQRLVSKA KK
101: DQRCCLCMTH CPAVFATKVS TARTKAIGDL SALPAAAGEG KAGEYWYHEA TQAWFDDADH YRMVRAMCRI SCTVCQSSGN KGKKGSKSSK AKHKTKFDSI
201: EQLKAHLFNK HCLYMCDLCL DGRKVFACEQ KLYTRPQLNQ HIKTGDSEVD GSEVERRGFV GHPMCKFCKS PFYAETDLDT HMTREHYSCH ICQRQHGGQD
301: DYFRNYDDLE MHFRRDHFFC EDRECLEKKF IVFQSEAELK RHNAVEHRKR MPHAQKNSAL QTPTSSRDWS ELDQSNSRGR RHNACLSTGS VDNTLLSVQN
401: SIANMGRGSG NQVAAVVSPL RSSSGHSSQA GQSSGTNHVW QQSHFPPLSR QEVPDARMGS CLQEASSPPI SGQSGYTPVV SRSSRTAARA MDVEFPPLSG
501: SNNRTAASTE QGLRKVAENT HAFGLRQQSN GIVHTHHSAQ HWSLENTDLI PSGSSHSPSW PTPNTNPHIS GSLSLPFAGN GRQETPVSRQ VLCSADDVRA
601: ANNSLVERMQ AALGMDRDRY SMFKEISGEY RQGVIDASKY LSYVEQFGLS HLVLEMSRLL PDPQKQKELA DAYYANLRLT SLQGNGGGGA VCSKDCTRKN
701: KGKGKLPAAA QDSLEDKLLS AASKLQPQVG GSRVLLREGC GAADGPLQEP RWPVKGAWQN RGGQRLVSKA KK
001: MDDSCAVCAE NLEWVGYGSC GHREVCSTCV VRLRFILNDR RCCICKTECP VVFVTKALGD YTKTISDFST TFPSVPKEGR VGSFWYHEET NVYFDDLNHY
101: TRIKAMCRLS CNLCNDTNKT RPKKEPNHCV RFKSVEHLKD HLNHQHKLHM CSLCLVGRKV FICEQKLFTK GQLNQHISSG DSEVDGSESE RGGFTGHPMC
201: EFCKRPFYGD NELYTHMSRE HYTCHICQRL KPGQYEYYGN YDDLEVHFRS DHFLCEDETC LAKKFIVFQI EAELKRHNAI DHGGRMSRSQ QNASLQIQAS
301: FQYPNSRRGR RRSSLREPNL VLLESQASYA FNDDNNLPQH VGRSGNSRLG ESSFPPLSVQ ANQGQSRFGQ NSESLVSNTT TTRQRHQTNR SATSGSSQAW
401: PALNRGPAEI SITSRVQSSG ASAQSQSRHH DRVESTRTLA SAVPQDARTT VGGCSSGSSL SSANATKRNN HHSSSTPKMS ETRSLAQPSH SDSPQISAVK
501: NRRSSSTSAN AGNIQVAQGV SDVQSDNKSL VEKIHASLGH DEELFMAFKN TSGKYRHGSI DARTYLEYVK GYGLSHLVLD MARLCPDPQR QKELIDTHNA
601: CLKGGNKGKA VKVESSSDSK GDRFVDTVRK LQFSDKSQDK DKDKDAYRSD KGKTKVTTLV NSSSAGVGLG DTGKQPKKTS KFLRTRLGEK SMAAVLDLRN
701: SNPEPEPEPK NDNSKRSQNS PGGLPLRGAW KRGSAKLFV
101: TRIKAMCRLS CNLCNDTNKT RPKKEPNHCV RFKSVEHLKD HLNHQHKLHM CSLCLVGRKV FICEQKLFTK GQLNQHISSG DSEVDGSESE RGGFTGHPMC
201: EFCKRPFYGD NELYTHMSRE HYTCHICQRL KPGQYEYYGN YDDLEVHFRS DHFLCEDETC LAKKFIVFQI EAELKRHNAI DHGGRMSRSQ QNASLQIQAS
301: FQYPNSRRGR RRSSLREPNL VLLESQASYA FNDDNNLPQH VGRSGNSRLG ESSFPPLSVQ ANQGQSRFGQ NSESLVSNTT TTRQRHQTNR SATSGSSQAW
401: PALNRGPAEI SITSRVQSSG ASAQSQSRHH DRVESTRTLA SAVPQDARTT VGGCSSGSSL SSANATKRNN HHSSSTPKMS ETRSLAQPSH SDSPQISAVK
501: NRRSSSTSAN AGNIQVAQGV SDVQSDNKSL VEKIHASLGH DEELFMAFKN TSGKYRHGSI DARTYLEYVK GYGLSHLVLD MARLCPDPQR QKELIDTHNA
601: CLKGGNKGKA VKVESSSDSK GDRFVDTVRK LQFSDKSQDK DKDKDAYRSD KGKTKVTTLV NSSSAGVGLG DTGKQPKKTS KFLRTRLGEK SMAAVLDLRN
701: SNPEPEPEPK NDNSKRSQNS PGGLPLRGAW KRGSAKLFV
Arabidopsis Description
Zinc ion binding/nucleic acid binding protein [Source:UniProtKB/TrEMBL;Acc:F4IK69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.