Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048205_P003 | Maize | nucleus | 54.01 | 75.54 |
| Zm00001d048207_P001 | Maize | nucleus | 51.14 | 73.88 |
| Os05t0279400-01 | Rice | plasma membrane | 74.01 | 72.45 |
| TraesCS1A01G139500.1 | Wheat | nucleus | 71.62 | 69.86 |
| TraesCS1B01G154700.2 | Wheat | nucleus | 72.34 | 69.67 |
| HORVU1Hr1G032900.1 | Barley | endoplasmic reticulum, mitochondrion, nucleus | 71.5 | 66.56 |
| TraesCS3B01G201500.1 | Wheat | nucleus | 43.71 | 51.55 |
| TraesCS3D01G176900.1 | Wheat | nucleus | 43.83 | 51.55 |
| VIT_07s0005g02190.t01 | Wine grape | nucleus | 48.26 | 49.27 |
| TraesCS5B01G347900.1 | Wheat | nucleus | 62.28 | 47.97 |
| TraesCS5A01G347000.1 | Wheat | nucleus | 61.32 | 47.58 |
| KRH68317 | Soybean | nucleus | 46.59 | 46.75 |
| TraesCS3A01G164600.4 | Wheat | nucleus | 43.71 | 46.5 |
| KRG96582 | Soybean | nucleus | 46.23 | 46.34 |
| TraesCS5D01G353400.1 | Wheat | nucleus | 61.92 | 46.2 |
| HORVU3Hr1G034270.3 | Barley | nucleus, plastid | 41.92 | 45.34 |
| Os01t0251200-01 | Rice | extracellular | 39.76 | 45.05 |
| Bra003493.1-P | Field mustard | nucleus | 43.23 | 44.84 |
| PGSC0003DMT400046261 | Potato | nucleus | 46.23 | 43.86 |
| AT3G62240.1 | Thale cress | nucleus | 42.28 | 43.47 |
| Solyc01g068390.2.1 | Tomato | nucleus | 45.75 | 43.46 |
| AT2G47090.1 | Thale cress | nucleus | 39.64 | 43.21 |
| CDY37785 | Canola | nucleus | 32.22 | 42.97 |
| Bra004478.1-P | Field mustard | nucleus | 33.77 | 42.15 |
| CDX80080 | Canola | nucleus | 33.65 | 42.07 |
| OQU89392 | Sorghum | cytosol, plasma membrane, vacuole | 4.79 | 18.96 |
| OQU89393 | Sorghum | plasma membrane | 5.27 | 18.64 |
Protein Annotations
| EnsemblPlants:KXG39981 | EnsemblPlantsGene:SORBI_3001G473600 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR001841 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | InterPro:Znf_RING | ncoils:Coil | PANTHER:PTHR22938 | PANTHER:PTHR22938:SF6 |
| PFscan:PS50089 | ProteinID:KXG39981 | ProteinID:KXG39981.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| UniParc:UPI00081AC815 | UniProt:A0A1B6QPY5 | MapMan:15.5.15 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:74579028..74583741
Molecular Weight (calculated)
91709.9 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.717
Length
835 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDYCVVCT EALEWVAYGS CGHREVCSTC VARLRFVMDD KKCCICKTVC PFVFVTKAMD KYTRVVTDFS VFPSGVNEGK AGDFWYHEDT QAYFDDADHY
101: RMIRAMCRLS CSVCDNAEDQ VALAAQAKRR SKFRSIDQLK GHLFHQHRLH MCNLCLEGRK VFICEQKLYS RSQLVQHMKT GDSEVDGSEV ERNGFAGHPM
201: CEFCKSSFYG DNELYTHMSR EHYSCHICQR QHPGQYDYFR NYDDLELHFR KDHFLCEDEA CLVKKFVVFP SEAELKRHNA LEHGGRMSRS QRNAALQIPT
301: SFIYRRNEQE QRRGRGRGRN APHDGSDSHI SSSAQNGRAT ADGHAGRLDN VSGSFQSLSV GSSSVGAEVG QGSRTGVLEQ LSFPPLLDPD IPDNSVDSFH
401: DETSFPSLSE QQSRYALALN QSARGAARLG DESLFPPLPG SSNNRGAASA QQGLQSLAKS TLAARLQQRT KGPVRVLNTA RPRPSENLGV LSSSTQTWPT
501: PDQGLLSGSS QLRPGTQTRE IGSMPAVSSN TVWNPVATNK MKHSVSTPNL VSGGSSAQAS SSSAYGSNRS QDPPQGNQTL PVAEDLRAAN KSLVERMRSA
601: LGMDEDRYSA FKEIAGEYRQ GIIDTSEYLS YVEQFGLSHL VPEMARLLPD PQKQRELADA YYTNTRFKSL QENGGGTSSQ EGNRKKKGKG KAPVTESSAA
701: NDVKGALADN ILDTVRRLQS NHQAQEGEAE VLSKDGYRPS KGVQPAAGPS SNLDSSAGAK DNSGKGGGNK QPKKTSKFLR ARLGDNSLAT LDLSRSSANP
801: ERPERESQGP EAGLPVRGAW KNGGGQKLFL SNGRK
101: RMIRAMCRLS CSVCDNAEDQ VALAAQAKRR SKFRSIDQLK GHLFHQHRLH MCNLCLEGRK VFICEQKLYS RSQLVQHMKT GDSEVDGSEV ERNGFAGHPM
201: CEFCKSSFYG DNELYTHMSR EHYSCHICQR QHPGQYDYFR NYDDLELHFR KDHFLCEDEA CLVKKFVVFP SEAELKRHNA LEHGGRMSRS QRNAALQIPT
301: SFIYRRNEQE QRRGRGRGRN APHDGSDSHI SSSAQNGRAT ADGHAGRLDN VSGSFQSLSV GSSSVGAEVG QGSRTGVLEQ LSFPPLLDPD IPDNSVDSFH
401: DETSFPSLSE QQSRYALALN QSARGAARLG DESLFPPLPG SSNNRGAASA QQGLQSLAKS TLAARLQQRT KGPVRVLNTA RPRPSENLGV LSSSTQTWPT
501: PDQGLLSGSS QLRPGTQTRE IGSMPAVSSN TVWNPVATNK MKHSVSTPNL VSGGSSAQAS SSSAYGSNRS QDPPQGNQTL PVAEDLRAAN KSLVERMRSA
601: LGMDEDRYSA FKEIAGEYRQ GIIDTSEYLS YVEQFGLSHL VPEMARLLPD PQKQRELADA YYTNTRFKSL QENGGGTSSQ EGNRKKKGKG KAPVTESSAA
701: NDVKGALADN ILDTVRRLQS NHQAQEGEAE VLSKDGYRPS KGVQPAAGPS SNLDSSAGAK DNSGKGGGNK QPKKTSKFLR ARLGDNSLAT LDLSRSSANP
801: ERPERESQGP EAGLPVRGAW KNGGGQKLFL SNGRK
001: MDDSCAVCAD NLEWVAYGSC GHREVCSTCV VRLRFVLDDP RCCICKTESP IVFVTKALGD YTRTINDFST FPSAPREGRV GAFWYHEDTQ AFFDDLDQYR
101: MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC
201: EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS
301: FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG
401: GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR
501: VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN
601: ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD
701: TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR
801: GVWRKGGANL FS
101: MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC
201: EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS
301: FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG
401: GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR
501: VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN
601: ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD
701: TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR
801: GVWRKGGANL FS
Arabidopsis Description
At3g62240 [Source:UniProtKB/TrEMBL;Acc:Q9M1Q0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.