Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU89392 | Sorghum | cytosol, plasma membrane, vacuole | 21.19 | 23.7 |
| TraesCS2A01G156000.1 | Wheat | cytosol | 20.76 | 21.03 |
| TraesCS2D01G161800.1 | Wheat | cytosol | 20.34 | 20.6 |
| TraesCS2B01G181500.1 | Wheat | cytosol | 19.92 | 19.92 |
| CDY37785 | Canola | nucleus | 16.53 | 6.23 |
| GSMUA_Achr5P20970_001 | Banana | nucleus | 17.8 | 5.91 |
| CDX80080 | Canola | nucleus | 16.53 | 5.84 |
| Bra004478.1-P | Field mustard | nucleus | 16.53 | 5.83 |
| AT3G62240.1 | Thale cress | nucleus | 18.64 | 5.42 |
| KXG39981 | Sorghum | nucleus | 18.64 | 5.27 |
| AT2G47090.1 | Thale cress | nucleus | 16.53 | 5.09 |
| Bra003493.1-P | Field mustard | nucleus | 16.95 | 4.97 |
| KRH68317 | Soybean | nucleus | 17.37 | 4.93 |
| VIT_07s0005g02190.t01 | Wine grape | nucleus | 16.53 | 4.77 |
| KRG96582 | Soybean | nucleus | 16.1 | 4.56 |
| PGSC0003DMT400046261 | Potato | nucleus | 16.1 | 4.32 |
| Solyc01g068390.2.1 | Tomato | nucleus | 15.68 | 4.21 |
Protein Annotations
| EnsemblPlants:OQU89393 | EnsemblPlantsGene:SORBI_3002G182601 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR22938 |
| PANTHER:PTHR22938:SF6 | ProteinID:OQU89393 | ProteinID:OQU89393.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0009DC8884 |
| UniProt:A0A1W0W4X2 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:56440313..56441161
Molecular Weight (calculated)
26765.0 Da
IEP (calculated)
7.614
GRAVY (calculated)
-0.006
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPMEWVAVS PCGHREVCVR CAASIRFFHN DLRCCICRSH CSTVVVTKAS SIRASGQRDF PFLWPPPPAF ASEVLVGHYF WYHRGMRAYF DDLFQYKEMK
101: EVCSTTTTTT TTTTTPPPPS SEESSRAAGA SRYPDVSLNV SVSQRRRAAE APVELEEPSS SDDGVLITLY YCCRGHSWFL WLFLSLLTIG GFLMLAEHPY
201: PDVLIVLLVC VLFSAFTACT VYAWRKFSNN SLQWRR
101: EVCSTTTTTT TTTTTPPPPS SEESSRAAGA SRYPDVSLNV SVSQRRRAAE APVELEEPSS SDDGVLITLY YCCRGHSWFL WLFLSLLTIG GFLMLAEHPY
201: PDVLIVLLVC VLFSAFTACT VYAWRKFSNN SLQWRR
001: MDDSCAVCAE NLEWVGYGSC GHREVCSTCV VRLRFILNDR RCCICKTECP VVFVTKALGD YTKTISDFST TFPSVPKEGR VGSFWYHEET NVYFDDLNHY
101: TRIKAMCRLS CNLCNDTNKT RPKKEPNHCV RFKSVEHLKD HLNHQHKLHM CSLCLVGRKV FICEQKLFTK GQLNQHISSG DSEVDGSESE RGGFTGHPMC
201: EFCKRPFYGD NELYTHMSRE HYTCHICQRL KPGQYEYYGN YDDLEVHFRS DHFLCEDETC LAKKFIVFQI EAELKRHNAI DHGGRMSRSQ QNASLQIQAS
301: FQYPNSRRGR RRSSLREPNL VLLESQASYA FNDDNNLPQH VGRSGNSRLG ESSFPPLSVQ ANQGQSRFGQ NSESLVSNTT TTRQRHRANQ GQSRFGQNSE
401: SLVSNTTTTR QRHQTNRSAT SGSSQAWPAL NRGPAEISIT SRVQSSGASA QSQSRHHDRV ESTRTLASAV PQDARTTVGG CSSGSSLSSA NATKRNNHHS
501: SSTPKMSETR SLAQPSHSDS PQISAVKNRR SSSTSANAGN IQVAQGVSDV QSDNKSLVEK IHASLGHDEE LFMAFKNTSG KYRHGSIDAR TYLEYVKGYG
601: LSHLVLDMAR LCPDPQRQKE LIDTHNACLK GGNKGKAVKV ESSSDSKGDR FVDTVRKLQF SDKSQDKDKD KDAYRSDKGK TKVTTLVNSS SAGVGLGDTG
701: KQPKKTSKFL RTRLGEKSMA AVLDLRNSNP EPEPEPKNDN SKRSQNSPGG LPLRGAWKRG SAKLFV
101: TRIKAMCRLS CNLCNDTNKT RPKKEPNHCV RFKSVEHLKD HLNHQHKLHM CSLCLVGRKV FICEQKLFTK GQLNQHISSG DSEVDGSESE RGGFTGHPMC
201: EFCKRPFYGD NELYTHMSRE HYTCHICQRL KPGQYEYYGN YDDLEVHFRS DHFLCEDETC LAKKFIVFQI EAELKRHNAI DHGGRMSRSQ QNASLQIQAS
301: FQYPNSRRGR RRSSLREPNL VLLESQASYA FNDDNNLPQH VGRSGNSRLG ESSFPPLSVQ ANQGQSRFGQ NSESLVSNTT TTRQRHRANQ GQSRFGQNSE
401: SLVSNTTTTR QRHQTNRSAT SGSSQAWPAL NRGPAEISIT SRVQSSGASA QSQSRHHDRV ESTRTLASAV PQDARTTVGG CSSGSSLSSA NATKRNNHHS
501: SSTPKMSETR SLAQPSHSDS PQISAVKNRR SSSTSANAGN IQVAQGVSDV QSDNKSLVEK IHASLGHDEE LFMAFKNTSG KYRHGSIDAR TYLEYVKGYG
601: LSHLVLDMAR LCPDPQRQKE LIDTHNACLK GGNKGKAVKV ESSSDSKGDR FVDTVRKLQF SDKSQDKDKD KDAYRSDKGK TKVTTLVNSS SAGVGLGDTG
701: KQPKKTSKFL RTRLGEKSMA AVLDLRNSNP EPEPEPKNDN SKRSQNSPGG LPLRGAWKRG SAKLFV
Arabidopsis Description
Zinc ion binding/nucleic acid binding protein [Source:UniProtKB/TrEMBL;Acc:F4IK69]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.