Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P10850_001 | Banana | cytosol | 16.88 | 70.59 |
| CDY37785 | Canola | nucleus | 35.44 | 40.26 |
| VIT_07s0005g02190.t01 | Wine grape | nucleus | 45.99 | 39.98 |
| KRH68317 | Soybean | nucleus | 46.27 | 39.54 |
| KRG96582 | Soybean | nucleus | 45.99 | 39.26 |
| CDX80080 | Canola | nucleus | 36.71 | 39.07 |
| Bra004478.1-P | Field mustard | nucleus | 36.43 | 38.71 |
| GSMUA_Achr8P10840_001 | Banana | extracellular, golgi | 38.82 | 38.02 |
| AT3G62240.1 | Thale cress | nucleus | 43.32 | 37.93 |
| Bra003493.1-P | Field mustard | nucleus | 42.33 | 37.39 |
| AT2G47090.1 | Thale cress | nucleus | 39.8 | 36.95 |
| PGSC0003DMT400046261 | Potato | nucleus | 43.88 | 35.45 |
| Solyc01g068390.2.1 | Tomato | nucleus | 43.6 | 35.27 |
| TraesCS2A01G156000.1 | Wheat | cytosol | 6.75 | 20.6 |
| TraesCS2D01G161800.1 | Wheat | cytosol | 6.75 | 20.6 |
| TraesCS2B01G181500.1 | Wheat | cytosol | 6.75 | 20.34 |
| OQU89392 | Sorghum | cytosol, plasma membrane, vacuole | 5.91 | 19.91 |
| OQU89393 | Sorghum | plasma membrane | 5.91 | 17.8 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P20970_001 | EnsemblPlants:GSMUA_Achr5T20970_001 | EnsemblPlantsGene:GSMUA_Achr5G20970_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR001841 | InterPro:Znf_RING | PANTHER:PTHR22938 | PANTHER:PTHR22938:SF6 | PFscan:PS50089 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000295D498 | UniProt:M0T0C6 | MapMan:15.5.15 | : | : |
Description
Putative ZOS5-06 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G20970_001]
Coordinates
chr5:-:22875979..22880244
Molecular Weight (calculated)
80204.6 Da
IEP (calculated)
8.483
GRAVY (calculated)
-0.451
Length
711 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSCAVCTE TLEWVAYGPC RHREVCSTCV VRLRFVLGDR RCCICMTECP VVFVTKALGD YTRMVVDFSV FPVSSTEGQV GRYWYHEDTQ AYFDDMDQYR
101: VIKAMCLLSC SVCDKNTDRQ GSERTKRRAR FRSIEQLKGH LFHQHKLVMC KLCLEGRKVT MCFFIDVELC CCIFTGVIGF LLVFIHLKMQ RHLNIRFLFS
201: LLQMYAIFHV VFLNFKRGAP LVFTCEQKLY TRSQLNQHMS TGDSEVDGSE SDRGGFMGHP MCKFCRKPFY GDHEHYMHMS TVHYTCHICR RCHAGQYDYY
301: RNYNDLEMHF RQDHFLCENQ ACLERKFVFF QTEAEMKRHN VLEHGEHMSH SKRNAALRIP TSFRYRQNEQ EHRRGRSRGF HSDPSVNQLS MGTQANLETA
401: LTSDSSEAST SIAVSEAPSR TPLSLSQSHT TTPMLKESFP PLPGATGQSK PIHTSESFYM NSLAVGLQRS RGSVVTNSAQ PSASSACNSN TARGMRQSTL
501: APNLAEGRLS GHAAPCMNSA VDGKETLTTG NQSITSMGDV YSANKSLVEK IRADLGMDEG RYGAFKSMSS EYRRGLINTW EYLSYVEQFG LSHLGVELAR
601: LCPDAQKEKE LIDAFHANMW NKSLLENGGS KGGRKGKGKG KAIVHAETRA TSARDTLDTV RKVEDGCRIA KDKLQSSARD ACANSSSVDQ SNVKKASKFH
701: RVRLGDGSAS F
101: VIKAMCLLSC SVCDKNTDRQ GSERTKRRAR FRSIEQLKGH LFHQHKLVMC KLCLEGRKVT MCFFIDVELC CCIFTGVIGF LLVFIHLKMQ RHLNIRFLFS
201: LLQMYAIFHV VFLNFKRGAP LVFTCEQKLY TRSQLNQHMS TGDSEVDGSE SDRGGFMGHP MCKFCRKPFY GDHEHYMHMS TVHYTCHICR RCHAGQYDYY
301: RNYNDLEMHF RQDHFLCENQ ACLERKFVFF QTEAEMKRHN VLEHGEHMSH SKRNAALRIP TSFRYRQNEQ EHRRGRSRGF HSDPSVNQLS MGTQANLETA
401: LTSDSSEAST SIAVSEAPSR TPLSLSQSHT TTPMLKESFP PLPGATGQSK PIHTSESFYM NSLAVGLQRS RGSVVTNSAQ PSASSACNSN TARGMRQSTL
501: APNLAEGRLS GHAAPCMNSA VDGKETLTTG NQSITSMGDV YSANKSLVEK IRADLGMDEG RYGAFKSMSS EYRRGLINTW EYLSYVEQFG LSHLGVELAR
601: LCPDAQKEKE LIDAFHANMW NKSLLENGGS KGGRKGKGKG KAIVHAETRA TSARDTLDTV RKVEDGCRIA KDKLQSSARD ACANSSSVDQ SNVKKASKFH
701: RVRLGDGSAS F
001: MDDSCAVCAD NLEWVAYGSC GHREVCSTCV VRLRFVLDDP RCCICKTESP IVFVTKALGD YTRTINDFST FPSAPREGRV GAFWYHEDTQ AFFDDLDQYR
101: MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC
201: EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS
301: FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG
401: GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR
501: VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN
601: ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD
701: TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR
801: GVWRKGGANL FS
101: MIKAMCRLSC GVCDKTEDKP REGGPRHHRQ RIKSVEQLKG HLYHKHKLHM CGLCLEGRKI FICEQKLYTR AQLNQHIQTG DSEVDGSESE RGGFAGHPMC
201: EFCRNPFYGD NELYTHMSTE HYTCHLCQRS QPGQYEYYKN YDDLEIHFRR DHFLCEDDSC LAKKFTVFQN ESELKRHNAI EHGGKMSRSQ RSAALQIPTS
301: FRYSRGNDQE NRRGRPRSFR REPGDEEYNL AVHAALRLSE SEYSRQEPAP PPSSAPPGFS ENNNIHVDDT DPLIQPMESL STTDMEPSSR YLQAVGSFGG
401: GGSRLGESAF PPLSGQQSSG QNVESLPTNT MAARLRRQTN RTSTASAIAS PSQGWPVINR GPGQASITSG GNHSSSGWPA IGRTPVQASS SSVQSRSHNR
501: VSQPRPLASA VPQAARNANR IPHSSSAPNL SDTRSLQPSH SDFPPVSSAV VQNRKTSSTT TQGSSNTQPP PDVQSANKSL IEKMRSALGH DEDVFVAFRN
601: ISGQYRQGSI DAKTYLEYVQ GYGLSHLVID LARLCPDPKR QKELIDTHNA SLREEDSKDN GRSAAQSSSQ PKESQSSKKN KGKAVKVVDP KETLADNFMD
701: TVRRLQSSQN PQEEEEEAIS KDKNTYRSDK GKSQVVGTDS SSTGSKQQRK KTSKFHRVRL GDGSMAALLD LNNSTRESEQ ESKDSNSNSN QNQTGGLPVR
801: GVWRKGGANL FS
Arabidopsis Description
At3g62240 [Source:UniProtKB/TrEMBL;Acc:Q9M1Q0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.