Factsheet for GSMUA_Achr8P20840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P16250_001	Banana	cytosol	80.36	73.47
GSMUA_Achr6P34210_001	Banana	cytosol	67.86	71.36
GSMUA_Achr10P...	Banana	cytosol	55.36	68.89
OQU92817	Sorghum	cytosol	65.18	48.83
TraesCS6A01G342400.1	Wheat	cytosol	74.55	34.01
GSMUA_Achr8P34360_001	Banana	mitochondrion	56.25	24.18
HORVU6Hr1G082550.1	Barley	cytosol	32.14	18.32
GSMUA_Achr9P19260_001	Banana	cytosol	31.7	12.07
GSMUA_Achr5P06230_001	Banana	cytosol	40.62	10.69
GSMUA_Achr7P09800_001	Banana	cytosol	40.18	10.56
GSMUA_Achr2P15830_001	Banana	cytosol	39.73	10.51
GSMUA_Achr2P19660_001	Banana	cytosol	39.29	10.37
GSMUA_Achr10P...	Banana	cytosol	34.38	9.86
GSMUA_Achr10P...	Banana	endoplasmic reticulum	28.12	7.03
GSMUA_Achr6P09420_001	Banana	endoplasmic reticulum	26.79	6.72
GSMUA_Achr7P05820_001	Banana	cytosol	10.27	5.61

Protein Annotations

EnsemblPlants:GSMUA_Achr8P20840_001	EnsemblPlants:GSMUA_Achr8T20840_001	EnsemblPlantsGene:GSMUA_Achr8G20840_001	Gene3D:3.30.420.40	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	SUPFAM:SSF53067	UniParc:UPI0002948A6A	UniProt:M0TS87
MapMan:35.1	:	:	:	:	:

Description

Heat shock cognate 70 kDa protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G20840_001]

Coordinates

chr8:+:25926318..25927718

Molecular Weight (calculated)

24303.0 Da

IEP (calculated)

9.578

GRAVY (calculated)

-0.287

Length

224 amino acids

Sequence
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IVANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FNDPSVQSDI KHWPFKVVAG
101: AADKPMIVVQ YKGEEKQFAA EEISSMVLIK MREIAEAYLG STVKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKASSAGEKN
201: DISGNPRALR RLRTACERAK RTLS

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.