Factsheet for TraesCS6A01G342400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P20840_001	Banana	cytosol	34.01	74.55
CDY02235	Canola	cytosol	26.48	70.27
GSMUA_Achr6P34210_001	Banana	cytosol	29.53	68.08
GSMUA_Achr2P16250_001	Banana	cytosol	33.81	67.76
GSMUA_Achr10P...	Banana	cytosol	24.64	67.22
CDY36723	Canola	cytosol	26.68	67.18
HORVU6Hr1G082550.1	Barley	cytosol	51.73	64.63
CDY04444	Canola	mitochondrion	22.61	62.01
CDX85038	Canola	cytosol	32.99	61.6
CDY53148	Canola	cytosol	31.77	60.94
CDY16175	Canola	cytosol	31.77	60.7
CDY40361	Canola	cytosol	29.33	60.0
CDY15421	Canola	cytosol	29.33	60.0
CDY10445	Canola	cytosol	29.33	60.0
CDY16796	Canola	cytosol	28.72	59.24
KRH21161	Soybean	cytosol	8.15	58.82
CDX89754	Canola	plastid	26.68	58.48
KRH70478	Soybean	cytosol	32.99	57.65
CDY31804	Canola	cytosol	48.88	57.55
Zm00001d007706_P001	Maize	cytosol	39.31	56.93
CDY03437	Canola	cytosol	29.74	55.3
KRH21041	Soybean	cytosol	32.59	54.24
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	22.0	51.67
KRH01639	Soybean	cytosol	67.62	51.31
GSMUA_Achr8P34360_001	Banana	mitochondrion	53.36	50.29
KRG98077	Soybean	cytosol	42.77	44.97
KRH30699	Soybean	cytosol	29.94	44.82
Os01t0688900-00	Rice	cytosol	44.4	43.34
KRH11209	Soybean	cytosol	25.25	38.39
TraesCS2A01G107900.1	Wheat	vacuole	31.16	35.42
TraesCS4A01G066100.1	Wheat	cytosol	30.96	26.03
TraesCS5A01G511700.1	Wheat	endoplasmic reticulum, golgi	23.42	25.44
TraesCS5A01G511800.1	Wheat	endoplasmic reticulum	16.5	22.44
TraesCS1A01G120200.1	Wheat	cytosol	31.77	18.55
TraesCS1A01G120100.4	Wheat	cytosol	31.16	18.32
TraesCS7A01G457100.1	Wheat	cytosol	26.88	17.91
TraesCS6A01G276700.1	Wheat	endoplasmic reticulum, unclear	25.25	14.0

Protein Annotations

EnsemblPlants:TraesCS6A01G342400.1	EnsemblPlantsGene:TraesCS6A01G342400	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	PANTHER:PTHR19375	PANTHER:PTHR19375:SF311
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS01036	SUPFAM:SSF100920	SUPFAM:SSF53067
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:575052759..575055613

Molecular Weight (calculated)

53940.7 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.164

Length

491 amino acids

Sequence
(BLAST)

001: MGVTECDDGP AIGIDLGTTY SCVAVWRKSH NRVEVIANDQ GNFTTPSCVA FTDAWRLIGD AAVNQAAMNP VNTIFDVKRL IGRHFSDALV QGDIKTSTWP
101: FKVVSGPSDR PMIVVQYMDE EKQFKAEEIS AMVLGKMREI AETYLGTEVK NAVITVPVYF TDSQRQATID AGTIAGLNVM RIINEPSAAA LAYGLSKMSP
201: SDEVKTVKAT AGDTHLGGED FNTHMVKHLV REFLKKYKMN DIRKNPRALR RLRTACEKAK RVLSCASQAT VEIDSLHDGI DFHGVITRTK FEELNMDLFS
301: NCIVHVEKCL SDAKMDKSMI DDILLLGGSS RIPKVQELLR DFFDGKELCT SINPDETVAY GAAVKAALLN DEGFKEVRDA VLLEVTPLSL GVETEGGVMS
401: VLIPKTTTIP VKKERVYTTC YDNQTQVLFL VYQGEGSETK DNILLGKFTL GGIPRAPRGE PKINVTFEID ADSILQHTAG TGNKNITITD D

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.