CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40361	Canola	cytosol	36.36	40.0
CDY10445	Canola	cytosol	36.36	40.0
CDY15421	Canola	cytosol	36.36	40.0
CDY16796	Canola	cytosol	35.98	39.92
CDX85038	Canola	cytosol	36.74	36.88
GSMUA_Achr6P34210_001	Banana	cytosol	28.79	35.68
CDY53148	Canola	cytosol	34.47	35.55
CDY16175	Canola	cytosol	34.47	35.41
HORVU6Hr1G082550.1	Barley	cytosol	52.65	35.37
CDY31804	Canola	cytosol	53.41	33.81
OQU92817	Sorghum	cytosol	34.47	30.43
TraesCS6A01G342400.1	Wheat	cytosol	55.3	29.74
CDY67465	Canola	cytosol	24.24	22.94
CDY04444	Canola	mitochondrion	14.77	21.79
CDY02235	Canola	cytosol	14.39	20.54
CDY36723	Canola	cytosol	14.39	19.49
CDY32364	Canola	cytosol	21.21	19.31
CDY32367	Canola	cytosol, mitochondrion, plastid	21.21	19.11
CDX89754	Canola	plastid	14.39	16.96
CDY12232	Canola	cytosol	29.92	14.03
CDY70083	Canola	cytosol	29.92	14.01
CDY49794	Canola	cytosol	35.23	12.22
CDX97975	Canola	cytosol	34.85	12.09
CDX76065	Canola	cytosol	36.36	11.79
CDY24089	Canola	endoplasmic reticulum, extracellular	36.36	11.19
CDY32270	Canola	cytosol, mitochondrion, plastid	32.2	10.79
CDY43337	Canola	cytosol	35.98	10.69
CDY40516	Canola	cytosol	32.2	10.18
CDY45119	Canola	extracellular	36.36	10.04
CDY60712	Canola	endoplasmic reticulum	31.82	9.67
CDX90500	Canola	endoplasmic reticulum	31.82	9.67

Protein Annotations

EnsemblPlants:CDY03437	EnsemblPlantsGene:GSBRNA2T00116089001	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078EQT6	InterPro:Heat_shock_70_CS
InterPro:Hsp_70_fam	PANTHER:PTHR19375	PANTHER:PTHR19375:SF321	PFAM:PF00012	PRINTS:PR00301	ProteinID:CDY03437
ProteinID:CDY03437.1	ScanProsite:PS01036	SEG:seg	SUPFAM:SSF53067	UniParc:UPI0004EF3E17	MapMan:35.1

Description

BnaC01g16450D

Coordinates

chrLK031943:-:461817..462611

Molecular Weight (calculated)

29079.8 Da

IEP (calculated)

7.582

GRAVY (calculated)

-0.220

Length

264 amino acids

Sequence
(BLAST)

001: MKEAAESFLG HTVKSAVVTV SAYFNDSQRQ AMKDAGSISG LNILRIINES TTAAIAYGLD KKGTKTGERN VLIFHLGGGT FDVSLLTIEE GVFEVKATAG
101: DTHLGGEDFD NRLVNHFVVE FKRKHKKDVS GNARALRRLR TACERVKRTL SSTAQMTIEI DYLHEGVDFY ATISRARFEE MKMDLFRKCM DPVEKVLRDA
201: KLDKSCVHEV VLVGGSTRIP KIQQLLQDFF NGNELCKSIN PDEAVAYGAA VQAAILTGEG SDKV

Best Arabidopsis Sequence Match ( AT1G16030.1 )
(BLAST)

001: MATKSEKAIG IDLGTTYSCV GVWMNDRVEI IPNDQGNRTT PSYVAFTDTE RLIGDAAKNQ VALNPQNTVF DAKRLIGRKF SDPSVQSDIL HWPFKVVSGP
101: GEKPMIVVSY KNEEKQFSPE EISSMVLVKM KEVAEAFLGR TVKNAVVTVP AYFNDSQRQA TKDAGAISGL NVLRIINEPT AAAIAYGLDK KGTKAGEKNV
201: LIFDLGGGTF DVSLLTIEEG VFEVKATAGD THLGGEDFDN RLVNHFVAEF RRKHKKDIAG NARALRRLRT ACERAKRTLS STAQTTIEID SLHEGIDFYA
301: TISRARFEEM NMDLFRKCMD PVEKVLKDAK LDKSSVHDVV LVGGSTRIPK IQQLLQDFFN GKELCKSINP DEAVAYGAAV QAAILTGEGS EKVQDLLLLD
401: VAPLSLGLET AGGVMTVLIP RNTTVPCKKE QVFSTYADNQ PGVLIQVYEG ERARTRDNNL LGTFELKGIP PAPRGVPQIN VCFDIDANGI LNVSAEDKTA
501: GVKNQITITN DKGRLSKEEI EKMVQDAEKY KAEDEQVKKK VEAKNSLENY AYNMRNTIKD EKLAQKLTQE DKQKIEKAID ETIEWIEGNQ LAEVDEFEYK
601: LKELEGICNP IISKMYQGGA AAGGMPTDGD FSSSGAAGGP KIEEVD

Arabidopsis Description

HSP70-5Hsp70b [Source:UniProtKB/TrEMBL;Acc:A0A178W9N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.