CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32364	Canola	cytosol	93.17	94.14
CDY67465	Canola	cytosol	27.99	29.39
CDY02235	Canola	cytosol	16.72	26.49
CDY16796	Canola	cytosol	21.5	26.47
CDY10445	Canola	cytosol	21.16	25.83
CDY40361	Canola	cytosol	21.16	25.83
CDY15421	Canola	cytosol	21.16	25.83
CDY36723	Canola	cytosol	16.72	25.13
CDY53148	Canola	cytosol	21.84	25.0
CDY04444	Canola	mitochondrion	14.68	24.02
CDX85038	Canola	cytosol	21.5	23.95
CDX76065	Canola	cytosol	65.19	23.46
CDY16175	Canola	cytosol	20.48	23.35
Zm00001d048458_P006	Maize	cytosol	18.77	23.01
Zm00001d025053_P001	Maize	cytosol	18.77	23.01
CDY24089	Canola	endoplasmic reticulum, extracellular	65.19	22.26
CDX89754	Canola	plastid	16.72	21.88
CDY43337	Canola	cytosol	65.19	21.48
CDY03437	Canola	cytosol	19.11	21.21
VIT_09s0002g04680.t01	Wine grape	cytosol	59.39	20.52
Solyc12g043120.1.1	Tomato	extracellular	58.7	20.33
CDY45119	Canola	extracellular	65.19	19.98
KRH09848	Soybean	endoplasmic reticulum, nucleus	58.7	19.93
KRH23474	Soybean	endoplasmic reticulum	58.36	19.81
PGSC0003DMT400080588	Potato	cytosol	57.34	19.79
KRH44373	Soybean	cytosol, endoplasmic reticulum, nucleus	57.34	19.72
PGSC0003DMT400080580	Potato	cytosol	58.36	19.66
KRH47052	Soybean	cytosol, endoplasmic reticulum	57.34	19.6
Solyc12g043110.1.1	Tomato	plastid	57.0	19.6
GSMUA_Achr7P09800_001	Banana	cytosol	56.66	19.48
GSMUA_Achr2P15830_001	Banana	cytosol	56.31	19.48
Zm00001d009948_P004	Maize	cytosol	54.61	19.21
EES19148	Sorghum	cytosol	55.29	19.04
TraesCS1B01G139500.1	Wheat	cytosol	53.92	18.99
Os01t0180800-01	Rice	plasma membrane	54.61	18.93
TraesCS1D01G121000.1	Wheat	cytosol	53.92	18.92
TraesCS1A01G120100.4	Wheat	cytosol	53.92	18.92
Zm00001d037717_P002	Maize	plastid	54.27	18.86
EES17815	Sorghum	cytosol	53.92	18.76
Zm00001d009950_P002	Maize	cytosol	54.95	18.74
HORVU1Hr1G027420.5	Barley	cytosol	53.24	18.73
HORVU1Hr1G026840.3	Barley	cytosol	53.24	18.68
Zm00001d037700_P002	Maize	cytosol	53.24	18.55
TraesCS1A01G120200.1	Wheat	cytosol	53.24	18.55
TraesCS1D01G121200.3	Wheat	cytosol, golgi, unclear	53.24	18.53
TraesCS1B01G139600.1	Wheat	cytosol, golgi	53.24	18.53
GSMUA_Achr5P06230_001	Banana	cytosol	53.58	18.45
GSMUA_Achr2P19660_001	Banana	cytosol	53.24	18.37
Os05t0181000-01	Rice	plasma membrane	53.24	18.29
CDY31804	Canola	cytosol	24.91	17.51
CDY49794	Canola	cytosol	45.05	17.35
CDX97975	Canola	cytosol	45.05	17.35
TraesCS3B01G298400.1	Wheat	cytosol	34.81	16.22
CDY70083	Canola	cytosol	24.23	12.59
CDY12232	Canola	cytosol	23.89	12.43
CDY32270	Canola	cytosol, mitochondrion, plastid	26.28	9.77
CDX90500	Canola	endoplasmic reticulum	28.33	9.55
CDY60712	Canola	endoplasmic reticulum	28.33	9.55
CDY40516	Canola	cytosol	26.28	9.22

Protein Annotations

EnsemblPlants:CDY32367	EnsemblPlantsGene:GSBRNA2T00051898001	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Hsp_70_fam
PANTHER:PTHR19375	PANTHER:PTHR19375:SF322	PFAM:PF00012	ProteinID:CDY32367	ProteinID:CDY32367.1	SUPFAM:SSF53067
UniParc:UPI0004EEA853	UniProt:A0A078H4F0	MapMan:35.1	:	:	:

Description

BnaC01g36860DBnaC01g36860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4F0]

Coordinates

chrLK032292:+:427059..427996

Molecular Weight (calculated)

32843.1 Da

IEP (calculated)

8.477

GRAVY (calculated)

0.000

Length

293 amino acids

Sequence
(BLAST)

001: MSGSRIDFGN QKCLVAVATK TRIRFFGIDG NNPKNLISQD KRLVGRRFSD VELQRDIKSL PYSVIEGEDG YPLICVSYLG KEKYFTPTEV MGMIFFKLKT
101: MILKHQPLAV VNCIISITAY FGHLGRRCVL DAASIAGLST LHLIHETTAT ALEYGILRPN FPERWQIAFI DISHSSLQVC ITRFTKGQLK VLSHGFDRWL
201: GGRDFDEVLL NHFSQISKAS LSLRECEELK KVLSENELAP LGIEDLVIKT KDFVEICSPL LQRLKVPLEK ALSDAGLRVG DVDAVQQPKT TSL

Best Arabidopsis Sequence Match ( AT1G79920.1 )
(BLAST)

001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEIR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLHL IHETTATALA YGIYKTDLPE NDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPM APLNIECLMA EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVVGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAATDA QNGGTENQQS TIVFPKGNPI PSVKALTFYR SGTFSIDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVSVT KDQSEETAKM DTDKASAEAA PASGDSDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQNISLTRRG KHSWRICRKL RIGCMKMGKM RPKVFMLQSS RSSRRWVTLL KCVTRSRWKE
701: GRSLISLATV LTATERQLCL MIPSLITLNW QRSKRF

Arabidopsis Description

Heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT1G79920]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.