CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53148	Canola	cytosol	98.05	98.44
CDY02235	Canola	cytosol	69.65	96.76
CDX85038	Canola	cytosol	97.67	95.44
CDY40361	Canola	cytosol	87.16	93.33
CDY15421	Canola	cytosol	86.77	92.92
CDY10445	Canola	cytosol	86.77	92.92
CDY36723	Canola	cytosol	69.65	91.79
CDY16796	Canola	cytosol	84.82	91.6
CDX89754	Canola	plastid	69.65	79.91
GSMUA_Achr2P16250_001	Banana	cytosol	74.71	78.37
CDY04444	Canola	mitochondrion	49.42	70.95
CDY31804	Canola	cytosol	96.89	59.71
OQU92817	Sorghum	cytosol	62.65	53.85
KRH70478	Soybean	cytosol	40.86	37.37
KRH01639	Soybean	cytosol	87.55	34.78
CDY03437	Canola	cytosol	35.41	34.47
TraesCS6A01G342400.1	Wheat	cytosol	60.7	31.77
Zm00001d007706_P001	Maize	cytosol	39.3	29.79
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	18.29	22.49
CDY32364	Canola	cytosol	23.35	20.69
HORVU6Hr1G082550.1	Barley	cytosol	31.52	20.61
CDY32367	Canola	cytosol, mitochondrion, plastid	23.35	20.48
CDY12232	Canola	cytosol	27.24	12.43
CDY70083	Canola	cytosol	27.24	12.41
CDX76065	Canola	cytosol	32.68	10.32
CDY49794	Canola	cytosol	29.57	9.99
CDX97975	Canola	cytosol	29.18	9.86
CDY24089	Canola	endoplasmic reticulum, extracellular	32.68	9.79
CDY43337	Canola	cytosol	32.3	9.34
CDY67465	Canola	cytosol	9.73	8.96
CDY45119	Canola	extracellular	32.68	8.79
CDY60712	Canola	endoplasmic reticulum	25.29	7.48
CDX90500	Canola	endoplasmic reticulum	25.29	7.48
CDY32270	Canola	cytosol, mitochondrion, plastid	21.79	7.11
CDY40516	Canola	cytosol	21.79	6.71

Protein Annotations

EnsemblPlants:CDY16175	EnsemblPlantsGene:GSBRNA2T00090618001	Gene3D:3.30.420.40	GO:A0A078FNZ5	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323
PFAM:PF00012	PRINTS:PR00301	ProteinID:CDY16175	ProteinID:CDY16175.1	ScanProsite:PS00297	ScanProsite:PS00329
SUPFAM:SSF53067	UniParc:UPI0004EF2E24	UniProt:A0A078FNZ5	MapMan:35.1	:	:

Description

BnaA09g29090DBnaA09g29090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNZ5]

Coordinates

chrLK032061:+:309874..311047

Molecular Weight (calculated)

28184.3 Da

IEP (calculated)

5.040

GRAVY (calculated)

-0.291

Length

257 amino acids

Sequence
(BLAST)

001: MSAGKGEGPA IGIDLGTTYS CVGVWQHDRV EIIANDQGNR TTPSYVAFTD SERLIGDAAK NQVAMNPINT VFDAKRLIGR RFSDSSVQSD MKLWPFKIIP
101: GPADKPMIVV DYKGEEKQFA AEEISSMVLI KMREIAEAYL GVTIKNAVVT VPAYFNDSQR QATKDAGVIA GLNATSVGEK NVLIFDLGGG TFDVSLLTIE
201: EGIFEVKATA GDTHLGGEDF DNRMVNHFVQ EFKRKSKKDI SEGKEDSFFH CADHHRD

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.