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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019840.1-P Field mustard cytosol 99.87 99.87
CDY49794 Canola cytosol 98.16 98.16
AT1G11660.3 Thale cress cytosol 89.88 89.65
Solyc02g080470.2.1 Tomato cytosol 62.81 63.48
VIT_19s0090g00340.t01 Wine grape cytosol 61.76 60.96
KRG98799 Soybean cytosol 59.4 59.01
KRH46160 Soybean cytosol 59.4 58.78
KRH14415 Soybean cytosol 58.34 57.44
GSMUA_Achr10P... Banana cytosol 57.29 55.83
Os06t0679800-00 Rice plasma membrane 36.66 52.54
Zm00001d036571_P002 Maize cytosol 51.64 52.19
TraesCS7D01G445600.1 Wheat cytosol 50.2 52.19
TraesCS7B01G359100.1 Wheat cytosol 50.2 52.19
TraesCS7A01G457100.1 Wheat cytosol 50.33 51.97
Zm00001d014358_P014 Maize cytosol 50.85 51.53
OQU76890 Sorghum cytosol 52.3 50.77
HORVU7Hr1G105330.1 Barley cytosol 49.8 49.8
CDX76065 Canola cytosol 49.93 46.68
CDY32364 Canola cytosol 17.61 46.21
CDY67465 Canola cytosol 16.69 45.52
CDY32367 Canola cytosol, mitochondrion, plastid 17.35 45.05
CDY24089 Canola endoplasmic reticulum, extracellular 50.33 44.64
CDY43337 Canola cytosol 50.33 43.08
CDY45119 Canola extracellular 50.2 39.96
CDY03437 Canola cytosol 12.09 34.85
CDY16796 Canola cytosol 9.86 31.51
CDY02235 Canola cytosol 7.62 31.35
CDY04444 Canola mitochondrion 7.36 31.28
CDY40361 Canola cytosol 9.72 30.83
CDY15421 Canola cytosol 9.72 30.83
CDY10445 Canola cytosol 9.72 30.83
CDY36723 Canola cytosol 7.88 30.77
CDY53148 Canola cytosol 10.12 30.08
CDX85038 Canola cytosol 10.12 29.28
CDY16175 Canola cytosol 9.86 29.18
CDY31804 Canola cytosol 14.98 27.34
CDX89754 Canola plastid 7.62 25.89
CDX90500 Canola endoplasmic reticulum 26.15 22.9
CDY60712 Canola endoplasmic reticulum 26.15 22.9
CDY32270 Canola cytosol, mitochondrion, plastid 23.65 22.84
CDY40516 Canola cytosol 24.44 22.28
CDY12232 Canola cytosol 14.72 19.89
CDY70083 Canola cytosol 14.72 19.86
Protein Annotations
Gene3D:1.20.1270.10MapMan:19.1.1.2.1.1MapMan:19.1.5.3Gene3D:2.60.34.10Gene3D:3.30.30.30Gene3D:3.30.420.40
Gene3D:3.90.640.10GO:A0A078E785EnsemblPlants:CDX97975ProteinID:CDX97975ProteinID:CDX97975.1EnsemblPlantsGene:GSBRNA2T00105329001
InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048PFAM:PF00012
PRINTS:PR00301PANTHER:PTHR19375PANTHER:PTHR19375:SF324SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067
UniParc:UPI0004EDF660SEG:seg::::
Description
BnaA06g07260D
Coordinates
chrLK031902:+:320327..323817
Molecular Weight (calculated)
84566.1 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.494
Length
761 amino acids
Sequence
(BLAST)
001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPGMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFKEPDV QKDLKLFPFE TSEDSADGGI
101: QIQLRYMGEV QSFSPVQILG MLLSHLKQVA EKSLKTPVSD CVIGIPSYFT NSQRLAYLDA AAIAGLRPLR LMHDCTATAL GYGIYKTDLA ANSSPTCIVF
201: VDIGHCDTQV CVASFGSGSM RLLSHGSDRN LGGRDFDEVL FNYFAVEFKE KYSIDVYTNT KACVRLRASC EKVKKVLSAN AEAPLNIECL MEEKDVKSFI
301: KREEFEKLSS GLLERLIVPC QKALADSGLS LDQIHSVELV GSGSRIPAIS KMLSSLFKRE LGRTVNASEC VARGCALQCA MLSPIFRVRD YEVQDSFPFS
401: IGFSSDKGPI NTPSNEMLFP KGQVFPSVKV LTLRRENTFH LKAFYEDHNE ISPDSPSQIG TFTIGPFQSS HGEAARVKVR VQLNLHGIVT IDSASLIEDP
501: KENTTSEETV SENNHQSPAT KDGTSDPSSG STGNDHKAIK RMKISVVENV SGALTKDELL EAKQREYSLV QQDLKMESTK DKKNALESFV YEMRDKMLNT
601: YRSTATESER ECIARNLQET EEWLYEDGDD ESENAYIEKL NDIKKLIDPI ENRFKDGEER VQASKDLAKT IADNRMAAES LPPPRKNAVL DECKKVERWL
701: HERTTEQESH NHPELQSGEI RRKADALNAT CKYIGKSNSP PNKSEHNGSH GRRNSDDMEL D
Best Arabidopsis Sequence Match ( AT1G11660.4 )
(BLAST)
001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD
Arabidopsis Description
HSP70-16Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.