CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53148	Canola	cytosol	95.44	98.05
CDY16175	Canola	cytosol	95.44	97.67
CDY02235	Canola	cytosol	68.44	97.3
CDY40361	Canola	cytosol	88.21	96.67
CDY10445	Canola	cytosol	87.83	96.25
CDY15421	Canola	cytosol	87.83	96.25
CDY16796	Canola	cytosol	85.93	94.96
CDY36723	Canola	cytosol	68.06	91.79
CDX89754	Canola	plastid	68.44	80.36
GSMUA_Achr2P16250_001	Banana	cytosol	72.62	77.96
CDY04444	Canola	mitochondrion	48.29	70.95
CDY31804	Canola	cytosol	94.68	59.71
OQU92817	Sorghum	cytosol	62.74	55.18
KRH70478	Soybean	cytosol	39.92	37.37
CDY03437	Canola	cytosol	36.88	36.74
KRH01639	Soybean	cytosol	87.83	35.7
TraesCS6A01G342400.1	Wheat	cytosol	61.6	32.99
Zm00001d007706_P001	Maize	cytosol	40.68	31.56
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	19.39	24.4
HORVU6Hr1G082550.1	Barley	cytosol	32.7	21.88
CDY32364	Canola	cytosol	23.95	21.72
CDY32367	Canola	cytosol, mitochondrion, plastid	23.95	21.5
CDY12232	Canola	cytosol	26.62	12.43
CDY70083	Canola	cytosol	26.62	12.41
CDX76065	Canola	cytosol	33.08	10.69
CDY49794	Canola	cytosol	29.66	10.25
CDY24089	Canola	endoplasmic reticulum, extracellular	33.08	10.14
CDX97975	Canola	cytosol	29.28	10.12
CDY67465	Canola	cytosol	10.27	9.68
CDY43337	Canola	cytosol	32.7	9.67
CDY45119	Canola	extracellular	33.08	9.1
CDY60712	Canola	endoplasmic reticulum	25.1	7.59
CDX90500	Canola	endoplasmic reticulum	25.1	7.59
CDY32270	Canola	cytosol, mitochondrion, plastid	22.05	7.36
CDY40516	Canola	cytosol	22.05	6.95

Protein Annotations

EnsemblPlants:CDX85038	EnsemblPlantsGene:GSBRNA2T00142478001	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:A0A078DCM4
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323	PFAM:PF00012	PRINTS:PR00301
ProteinID:CDX85038	ProteinID:CDX85038.1	ScanProsite:PS00297	ScanProsite:PS00329	SUPFAM:SSF53067	UniParc:UPI0004EE895B
MapMan:35.1	:	:	:	:	:

Description

BnaC05g20170D

Coordinates

chrLK031839:+:1674285..1675528

Molecular Weight (calculated)

28823.2 Da

IEP (calculated)

6.256

GRAVY (calculated)

-0.315

Length

263 amino acids

Sequence
(BLAST)

001: MSGGKGEGPA IGIDLGTTYS CVGVWQHDRV EIIANDQGNR TTPSYVAFTD SERLIGDAAK NQVAMNPINT VFDAKRLIGR RFSDSSVQSD MKLWPFKIIP
101: GPADKPMIVV SYKGEEKQFA AEEISSMVLI KMREIAEAYL GVTIKNAVVT VPAYFNDSQR QATKDAGVIA GLNATSVGEK NVLIFDLGGG TFDVSLLTIE
201: EGIFEVKATA GDTHLGGEDF DNRMVNHFVQ EFKRKSKKDI SGNPRALRSK ENSFFHCSDH HRD

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.