CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97975	Canola	cytosol	98.16	98.16
AT1G11660.3	Thale cress	cytosol	90.14	89.91
Solyc02g080470.2.1	Tomato	cytosol	62.94	63.61
VIT_19s0090g00340.t01	Wine grape	cytosol	61.89	61.09
KRG98799	Soybean	cytosol	59.66	59.27
KRH46160	Soybean	cytosol	59.66	59.04
KRH14415	Soybean	cytosol	58.87	57.96
GSMUA_Achr10P...	Banana	cytosol	57.95	56.47
Os06t0679800-00	Rice	plasma membrane	36.53	52.35
Zm00001d036571_P002	Maize	cytosol	51.64	52.19
TraesCS7B01G359100.1	Wheat	cytosol	50.2	52.19
TraesCS7D01G445600.1	Wheat	cytosol	50.2	52.19
TraesCS7A01G457100.1	Wheat	cytosol	50.33	51.97
Zm00001d014358_P014	Maize	cytosol	50.85	51.53
OQU76890	Sorghum	cytosol	52.17	50.64
HORVU7Hr1G105330.1	Barley	cytosol	49.8	49.8
CDX76065	Canola	cytosol	50.07	46.81
CDY32364	Canola	cytosol	17.61	46.21
CDY67465	Canola	cytosol	16.82	45.88
CDY32367	Canola	cytosol, mitochondrion, plastid	17.35	45.05
CDY24089	Canola	endoplasmic reticulum, extracellular	50.46	44.76
CDY43337	Canola	cytosol	50.46	43.19
CDY45119	Canola	extracellular	50.33	40.06
CDY03437	Canola	cytosol	12.22	35.23
CDY16796	Canola	cytosol	9.99	31.93
CDY02235	Canola	cytosol	7.62	31.35
CDY04444	Canola	mitochondrion	7.36	31.28
CDY40361	Canola	cytosol	9.86	31.25
CDY10445	Canola	cytosol	9.86	31.25
CDY15421	Canola	cytosol	9.86	31.25
CDY36723	Canola	cytosol	7.88	30.77
CDY53148	Canola	cytosol	10.25	30.47
CDX85038	Canola	cytosol	10.25	29.66
CDY16175	Canola	cytosol	9.99	29.57
CDY31804	Canola	cytosol	15.11	27.58
CDX89754	Canola	plastid	7.62	25.89
CDY60712	Canola	endoplasmic reticulum	25.89	22.67
CDX90500	Canola	endoplasmic reticulum	25.89	22.67
CDY32270	Canola	cytosol, mitochondrion, plastid	23.39	22.59
CDY40516	Canola	cytosol	24.18	22.04
CDY12232	Canola	cytosol	14.59	19.72
CDY70083	Canola	cytosol	14.59	19.68

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	GO:A0A078IK39	UniProt:A0A078IK39	EnsemblPlants:CDY49794	ProteinID:CDY49794	ProteinID:CDY49794.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00093814001
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	PFAM:PF00012
PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF324	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067
UniParc:UPI0004EE6E15	SEG:seg	:	:	:	:

Description

BnaCnng18070DBnaCnng18070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK39]

Coordinates

chrLK032859:+:48223..51877

Molecular Weight (calculated)

84575.1 Da

IEP (calculated)

5.798

GRAVY (calculated)

-0.480

Length

761 amino acids

Sequence
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPGMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QKDLKLFPFE TSEDSADGGI
101: QIRLRYMGEV QSFSPVQILG MLLSHLKQVA EKSLNTPVSD CVIGIPSYFT NSQRLAYLDA AAIAGLRPLR LMHDCTATAL GYGIYKTDLA ANSSPTCIVF
201: VDIGHCDTQV CVASFGSGSM RVLSHGSDRN LGGRDFDEVL FNYFAVEFKE KYSIDVYTNT KACVRLRASC EKVKKVLSAN AEAPLNIECL MEEKDVKSFI
301: KREEFEQLSS GLLERLIVPC QKALADSGLS LDQIHSVELV GSGSRIPAIS KMLSSLFKRE LGRTVNASEC VARGCALQCA MLSPIFRVRD YEVQDSFPFS
401: IGFSSDKGPI NTPSNEMLFP KGQVFPSVKV LTLRRENTFH LEAFYADHNE ISPDSPIQIG SFTIGPFQSS HGQAARVKVR VQLNLHGIVT IDSASLIEDP
501: KENTTSEETV SENNHQSPAT KDGTSDPSSG PTGNDHKAIK RMKISVVENV SGALTKDELL EAKQREYSLV QQDLKMESTK DKKNALESFV YEMRDKMLNT
601: YRSTATESER ECIARNLQET EEWLYEDGDD ESENAYIEKL NDIKKLIDPI ENRYKDAEER VQASKDLAKT IADNRMAAES LPPPRKNAVL DECKKVERWL
701: HERTTEQESH NHPELQSGEI RRKADALNAT CKYIGKSNSP PTKSEHNGSH GRRNSDDMEL D

Best Arabidopsis Sequence Match ( AT1G11660.4 )
(BLAST)

001: MSVVGFDVGN ENCVIAVAKQ RGIDVLLNDE SNRENPAMVS FGEKQRFMGA AAAASATMHP KSTISQLKRL IGRKFREPDV QNDLRLFPFE TSEDSDGGIQ
101: IRLRYMGEIQ SFSPVQILGM LLSHLKQIAE KSLKTPVSDC VIGIPSYFTN SQRLAYLDAA AIAGLRPLRL MHDSTATALG YGIYKTDLVA NSSPTYIVFI
201: DIGHCDTQVC VASFESGSMR VRSHAFDRNL GGRDFDEVLF NHFALEFKEK YNIDVYTNTK ACVRLRASCE KVKKVLSANA EAQLNIECLM EEKDVRSFIK
301: REEFEQLSAG LLERLIVPCQ KALADSGLSL DQIHSVELVG SGSRIPAISK MLSSLFKREL GRTVNASECV ARGCALQCAM LSPVFRVRDY EVQDSYPFAI
401: GFSSDKGPIN TPSNELLFPK GQIFPSVKVL TLHRENTFQL EAFYANHNEL SPDIPTQISS FMIGPFHISH GEAARVKVRV QLNLHGIVTI DSATLIEYHK
501: ENITSEEMIS EENHQSSAMK DGSLDPSSGS IGNEPKAIKR MEIPVVANVS GALTKDELSE AKQRENSLVE QDLKMESTKD KKNALESFVY EMRDKMLNTY
601: RNTATESERE CIARNLQETE EWLYEDGDDE SENAYIEKLN DVKKLIDPIE NRFKDGEERV QASKDLLKTI ADNRMAAESL PPPRKNAVLD ECHKAERWLH
701: EKTTEQESLP KDANPELQSA EIRRKADALN ATCKYIGKSN SPPAKPEHNG SYGSRKSDDM ELD

Arabidopsis Description

HSP70-16Heat shock 70 kDa protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.