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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
BaCelLo:secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014713.1-P Field mustard cytosol 90.33 98.65
CDX76065 Canola cytosol 90.33 98.65
CDY24089 Canola endoplasmic reticulum, extracellular 89.31 92.54
AT1G79930.1 Thale cress cytosol 83.24 89.05
CDY45119 Canola extracellular 90.21 83.89
AT1G79920.2 Thale cress cytosol 67.38 81.39
VIT_09s0002g04680.t01 Wine grape cytosol 73.34 76.89
Solyc12g043120.1.1 Tomato extracellular 72.44 76.12
PGSC0003DMT400080588 Potato cytosol 71.65 75.03
Solyc12g043110.1.1 Tomato plastid 71.88 75.0
KRH23474 Soybean endoplasmic reticulum 71.99 74.16
KRH09848 Soybean endoplasmic reticulum, nucleus 71.99 74.16
PGSC0003DMT400080580 Potato cytosol 71.99 73.56
GSMUA_Achr7P09800_001 Banana cytosol 70.08 73.12
GSMUA_Achr5P06230_001 Banana cytosol 68.62 71.68
KRH44373 Soybean cytosol, endoplasmic reticulum, nucleus 68.5 71.48
GSMUA_Achr2P15830_001 Banana cytosol 67.94 71.31
GSMUA_Achr2P19660_001 Banana cytosol 67.94 71.14
Os01t0180800-01 Rice plasma membrane 67.49 71.01
KRH47052 Soybean cytosol, endoplasmic reticulum 67.83 70.36
TraesCS1B01G139500.1 Wheat cytosol 65.47 69.95
TraesCS1A01G120100.4 Wheat cytosol 65.69 69.94
HORVU1Hr1G026840.3 Barley cytosol 65.47 69.7
TraesCS1D01G121000.1 Wheat cytosol 65.47 69.7
EES17815 Sorghum cytosol 65.8 69.48
EES19148 Sorghum cytosol 66.03 68.98
Zm00001d009948_P004 Maize cytosol 64.57 68.91
Zm00001d037700_P002 Maize cytosol 64.9 68.61
TraesCS1D01G121200.3 Wheat cytosol, golgi, unclear 64.68 68.29
HORVU1Hr1G027420.5 Barley cytosol 63.89 68.19
TraesCS1B01G139600.1 Wheat cytosol, golgi 64.57 68.17
TraesCS1A01G120200.1 Wheat cytosol 64.34 68.01
Zm00001d048458_P006 Maize cytosol 18.22 67.78
Zm00001d025053_P001 Maize cytosol 18.22 67.78
Zm00001d037717_P002 Maize plastid 63.55 67.02
Zm00001d009950_P002 Maize cytosol 64.23 66.47
Os05t0181000-01 Rice plasma membrane 63.33 66.0
CDY32364 Canola cytosol 21.48 65.86
CDY32367 Canola cytosol, mitochondrion, plastid 21.48 65.19
CDY67465 Canola cytosol 19.91 63.44
CDY49794 Canola cytosol 43.19 50.46
CDX97975 Canola cytosol 43.08 50.33
CDY02235 Canola cytosol 7.54 36.22
CDY03437 Canola cytosol 10.69 35.98
CDY36723 Canola cytosol 7.76 35.38
CDY16796 Canola cytosol 9.22 34.45
CDY10445 Canola cytosol 9.11 33.75
CDY15421 Canola cytosol 9.11 33.75
CDY40361 Canola cytosol 9.11 33.75
CDY53148 Canola cytosol 9.67 33.59
TraesCS3B01G298400.1 Wheat cytosol 23.4 33.07
CDY04444 Canola mitochondrion 6.64 32.96
CDX85038 Canola cytosol 9.67 32.7
CDY16175 Canola cytosol 9.34 32.3
CDX89754 Canola plastid 7.76 30.8
CDY31804 Canola cytosol 13.27 28.3
CDY40516 Canola cytosol 23.06 24.55
CDX90500 Canola endoplasmic reticulum 23.73 24.28
CDY32270 Canola cytosol, mitochondrion, plastid 21.48 24.24
CDY60712 Canola endoplasmic reticulum 23.62 24.17
CDY12232 Canola cytosol 13.5 21.31
CDY70083 Canola cytosol 13.5 21.28
Protein Annotations
Gene3D:1.20.1270.10MapMan:19.1.1.2.1.1MapMan:19.1.5.3Gene3D:3.30.30.30Gene3D:3.30.420.40Gene3D:3.90.640.10
GO:A0A078HZM2UniProt:A0A078HZM2EnsemblPlants:CDY43337ProteinID:CDY43337ProteinID:CDY43337.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00076393001InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sf
InterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048PFAM:PF00012PRINTS:PR00301PANTHER:PTHR19375
PANTHER:PTHR19375:SF322SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067UniParc:UPI0004EDBE61SEG:seg
Description
BnaC04g25190DBnaC04g25190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZM2]
Coordinates
chrLK032553:+:42686..49542
Molecular Weight (calculated)
98686.8 Da
IEP (calculated)
5.439
GRAVY (calculated)
-0.411
Length
889 amino acids
Sequence
(BLAST)
001: MCLLDLDPRD RADFCFHLFL YKYFVFNYKL SIKLLSLVPS SRSDSPLPTK PKKKALGTQT PLPISRVSNK TEALRMSVVG FDFGNENCLV AVARQRGIDV
101: VLNDESNRET PAIVCFGEKQ RFIGTAGAAS TMMNPKNSIS QIKRLVGRQF SDPELQRDIK SLPFSVTEGP DGYPLIHASY LGEKRAFTPT QVMGMMLSNL
201: KGIAEKNLNA AVVDCCIGIP VYFTDLQRRA VLDAATIAGL HPLHLIHETT ATALAYGIYK TDLPESEPLN VAFIDIGHAS MQVCIAGFKK GQLKVLSHGF
301: DRSLGGRDFD EVLFNHFAAK FREEYKIDVA QNAKASLRLR AACEKLKKVL SANPVAPLNI ECLMDEKDVR GVIKREEFEE ISIPILERVK RPLEKALSDA
401: GLSIEDVHMV EVVGSGSRVP AIIKILTEFF GKEPRRTMNA SECVSRGCAL QCAILSPTFK VREFQVHESF PFSISLAWKG AAADAQNGGA ENQQSTIVFP
501: KGNSIPSVKA LTFYRSGTFS VDVQYSDATD LKAPPKISTY TIGPFQSSKG ERAKLKVKVR LTLHGIVSVE SATLLEEEEV EVKVTAEQMD TDKASGESDV
601: NMQDAKETSD AAGTDNGVPE PVQMETDSKA EAPKKKVKKT NVPLSELVYG ALQSVEVQKA VEKEYEMALQ DRVMEETKDK KNAVESYVYD MRNKLSEKYH
701: EYMTESEREA FLAKLQEVED WLYEDGEDET KGVYVAKLEE LKKVGDPVEM RYKESQERGT VIGQLGHCVN SYREAAVSND SKFDHIELEE KQKVLNECVE
801: AEAWMREKQQ QQEALPKHAT PAFLSADVTR KAEALDKFCR PIMTKPKPVA KPEAPQAKAA ADEEKSEPQP EPASGEEPME TEKPTEDSA
Best Arabidopsis Sequence Match ( AT1G79930.1 )
(BLAST)
001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK
801: GGEQADEGKS EPEQPASAEP METENPAEGS T
Arabidopsis Description
HSP70-14Heat shock 70 kDa protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.