Factsheet for TraesCS1B01G139600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G121200.3	Wheat	cytosol, golgi, unclear	99.05	99.05
TraesCS1A01G120200.1	Wheat	cytosol	98.22	98.34
HORVU1Hr1G027420.5	Barley	cytosol	96.44	97.48
TraesCS1B01G139500.1	Wheat	cytosol	87.05	88.1
EES19148	Sorghum	cytosol	83.85	82.96
EES17815	Sorghum	cytosol	82.78	82.78
Zm00001d037700_P002	Maize	cytosol	81.59	81.69
Zm00001d009948_P004	Maize	cytosol	80.52	81.39
Zm00001d037717_P002	Maize	plastid	80.4	80.31
Zm00001d009950_P002	Maize	cytosol	80.4	78.81
Os05t0181000-01	Rice	plasma membrane	79.45	78.43
Zm00001d025053_P001	Maize	cytosol	21.02	74.06
GSMUA_Achr7P09800_001	Banana	cytosol	74.7	73.83
GSMUA_Achr5P06230_001	Banana	cytosol	74.23	73.44
Zm00001d048458_P006	Maize	cytosol	20.78	73.22
GSMUA_Achr2P19660_001	Banana	cytosol	73.52	72.91
VIT_09s0002g04680.t01	Wine grape	cytosol	72.8	72.29
GSMUA_Achr2P15830_001	Banana	cytosol	72.45	72.02
Solyc12g043120.1.1	Tomato	extracellular	72.33	71.99
KRH09848	Soybean	endoplasmic reticulum, nucleus	73.16	71.38
KRH23474	Soybean	endoplasmic reticulum	73.16	71.38
PGSC0003DMT400080588	Potato	cytosol	71.62	71.02
Solyc12g043110.1.1	Tomato	plastid	71.73	70.89
AT1G79930.1	Thale cress	cytosol	69.48	70.4
CDX76065	Canola	cytosol	68.05	70.39
Bra039679.1-P	Field mustard	cytosol	68.29	70.29
Bra014713.1-P	Field mustard	cytosol	67.81	70.15
KRH47052	Soybean	cytosol, endoplasmic reticulum	70.67	69.43
PGSC0003DMT400080580	Potato	cytosol	71.62	69.31
KRH44373	Soybean	cytosol, endoplasmic reticulum, nucleus	69.83	69.01
CDY24089	Canola	endoplasmic reticulum, extracellular	68.29	67.02
AT1G79920.2	Thale cress	cytosol	58.08	66.44
CDY43337	Canola	cytosol	68.17	64.57
CDY45119	Canola	extracellular	68.17	60.04
CDY32364	Canola	cytosol	18.76	54.48
CDY32367	Canola	cytosol, mitochondrion, plastid	18.53	53.24
CDY67465	Canola	cytosol	17.34	52.33
TraesCS7B01G359100.1	Wheat	cytosol	39.79	45.77
TraesCS3B01G298400.1	Wheat	cytosol	24.7	33.07
TraesCS5B01G065900.1	Wheat	endoplasmic reticulum, extracellular, golgi	12.83	24.05
TraesCS6B01G304200.1	Wheat	golgi	24.35	23.14
TraesCS1B01G206700.1	Wheat	cytosol	6.18	20.97
TraesCS4B01G342600.1	Wheat	endoplasmic reticulum	9.74	19.71
TraesCS7B01G369100.1	Wheat	endoplasmic reticulum	9.74	19.07
TraesCS4B01G243400.1	Wheat	cytosol	13.06	18.97
TraesCS1B01G163400.2	Wheat	mitochondrion	14.37	18.56

Protein Annotations

EnsemblPlants:TraesCS1B01G139600.1	EnsemblPlantsGene:TraesCS1B01G139600	Gene3D:1.20.1270.10	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PANTHER:PTHR19375	PANTHER:PTHR19375:SF322	PFAM:PF00012	PRINTS:PR00301	SEG:seg	SUPFAM:SSF100920
SUPFAM:SSF100934	SUPFAM:SSF53067	TIGR:cd10228	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	:

Description

No Description!

Coordinates

chr1B:+:183870265..183878456

Molecular Weight (calculated)

93439.8 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.495

Length

842 amino acids

Sequence
(BLAST)

001: MSVVGFDLGN ESCIVGVARQ RGIDVVLNEE SKRETPAIVC FGDKQRFIGT AGAANSTMNP KNSISQIKRL LGRKFADPEL QDDIKAFPFR VSEGPDGFPL
101: VHVRYLGEER SFTPTQLLAM VLSNLKAIAE GNLNSAVIDC CIGIPVYFTD LQRRAVIDAA TIAGLRPLRL FHETTATALA YGIYKTDLPE NDQLNVAFVD
201: VGNASMQVSI VGYKKGQLKM LSHAYDRSLG GRDFDEALFK HFAAKFKEEY KIDVYQNARA CIRLRVACEK LKKMLSANPE APMNIECLMD EKDVRGFIKR
301: DEFEQISAPV LERVKGPLEK ALSEAGLTTE SLHFVEVVGS GSRVPAVMKI ITEFFGKEPR RTMNASECVA RGCALQCAIL SPTFKVREFQ VNEGFPFSVA
401: LSWKPDAQNN ESQQTVVFPK GNPMPSIKAL TFYRSSTFAV DVLNVDTDDL QITHKISTYT IGPFQSSKGE KAKLKVKVRL NIHGIVSLES ATMLEEEEVE
501: VPVSSTSEVP KDATRMETDD APQDPASSAG DHMQEPKGAA DHAEGAAENG AQDSEEKTVP MDTDTKVEPS KKKVKKTNVP VAELVYGAMG TVELEKAVEK
601: EYEMALQDRV MEETKDKKNS VEAYVYDMRN KIHEKYNDFV MSEDIEGLMA KLQEVEDWLY EDGEDETKGV YVAKLEELKK LGGPIEMRYK EWTERGPALE
701: QLVYCIRSFR EAALSGDQKF DHIDESEKQK VVNECSDAET WLTEKKQQQD ALPKHANPVL LVSDIKKKAE ALDRFCKPIM TKPRPAPKPQ TPPPAETPSP
801: EAQTPEQQSN GADESAEPAS DGAQDEHAVE QMDTDKDDPS QA

Best Arabidopsis Sequence Match ( AT1G79930.1 )
(BLAST)

001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK
801: GGEQADEGKS EPEQPASAEP METENPAEGS T

Arabidopsis Description

HSP70-14Heat shock 70 kDa protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.