Factsheet for PGSC0003DMT400080580

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g043120.1.1	Tomato	extracellular	94.48	97.16
PGSC0003DMT400080588	Potato	cytosol	91.38	93.64
VIT_09s0002g04680.t01	Wine grape	cytosol	79.43	81.49
KRH09848	Soybean	endoplasmic reticulum, nucleus	79.31	79.95
KRH23474	Soybean	endoplasmic reticulum	78.97	79.61
Bra039679.1-P	Field mustard	cytosol	74.37	79.1
CDX76065	Canola	cytosol	73.56	78.62
Bra014713.1-P	Field mustard	cytosol	73.33	78.38
AT1G79930.1	Thale cress	cytosol	74.6	78.1
KRH47052	Soybean	cytosol, endoplasmic reticulum	74.48	75.61
GSMUA_Achr7P09800_001	Banana	cytosol	74.02	75.59
KRH44373	Soybean	cytosol, endoplasmic reticulum, nucleus	74.02	75.59
CDY24089	Canola	endoplasmic reticulum, extracellular	74.37	75.41
GSMUA_Achr2P15830_001	Banana	cytosol	72.41	74.38
GSMUA_Achr5P06230_001	Banana	cytosol	72.53	74.15
GSMUA_Achr2P19660_001	Banana	cytosol	71.95	73.73
AT1G79920.2	Thale cress	cytosol	62.07	73.37
Os01t0180800-01	Rice	plasma membrane	70.57	72.66
EES17815	Sorghum	cytosol	69.77	72.09
CDY43337	Canola	cytosol	73.56	71.99
EES19148	Sorghum	cytosol	70.23	71.8
TraesCS1B01G139600.1	Wheat	cytosol, golgi	69.31	71.62
TraesCS1D01G121200.3	Wheat	cytosol, golgi, unclear	69.08	71.38
TraesCS1A01G120200.1	Wheat	cytosol	68.97	71.34
HORVU1Hr1G026840.3	Barley	cytosol	68.39	71.26
Zm00001d009948_P004	Maize	cytosol	68.16	71.19
Zm00001d037700_P002	Maize	cytosol	68.74	71.11
TraesCS1A01G120100.4	Wheat	cytosol	68.16	71.02
TraesCS1D01G121000.1	Wheat	cytosol	68.16	71.02
TraesCS1B01G139500.1	Wheat	cytosol	67.82	70.91
HORVU1Hr1G027420.5	Barley	cytosol	67.82	70.83
Zm00001d037717_P002	Maize	plastid	67.36	69.51
Zm00001d009950_P002	Maize	cytosol	68.62	69.5
Zm00001d025053_P001	Maize	cytosol	18.85	68.62
Zm00001d048458_P006	Maize	cytosol	18.74	68.2
Os05t0181000-01	Rice	plasma membrane	65.98	67.29
CDY45119	Canola	extracellular	73.79	67.15
CDY32364	Canola	cytosol	20.0	60.0
CDY32367	Canola	cytosol, mitochondrion, plastid	19.66	58.36
CDY67465	Canola	cytosol	17.82	55.56
TraesCS3B01G298400.1	Wheat	cytosol	23.1	31.96
PGSC0003DMT400041135	Potato	extracellular	24.37	23.82
PGSC0003DMT400050462	Potato	cytosol	12.87	22.09
PGSC0003DMT400077358	Potato	cytosol	14.02	21.29

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:102600791	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10	Gene3D:3.30.30.30
Gene3D:3.30.420.40	Gene3D:3.90.640.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
UniProt:M1D3P9	PFAM:PF00012	EnsemblPlantsGene:PGSC0003DMG401031379	PGSC:PGSC0003DMG401031379	EnsemblPlants:PGSC0003DMT400080580	PRINTS:PR00301
PANTHER:PTHR19375	PANTHER:PTHR19375:SF322	SUPFAM:SSF100920	SUPFAM:SSF100934	SUPFAM:SSF53067	UniParc:UPI000295A18E
SEG:seg	:	:	:	:	:

Description

Heat shock 70 kDa protein [Source:PGSC_GENE;Acc:PGSC0003DMG401031379]

Coordinates

chr12:-:50389710..50393793

Molecular Weight (calculated)

95991.8 Da

IEP (calculated)

5.137

GRAVY (calculated)

-0.439

Length

870 amino acids

Sequence
(BLAST)

001: MSVVGFDFGN ESGVVAVARQ RGIDVVLNDE SKRETPAIVC FGEKQRFLGT AGAASSMMNP KNTISQIKRL IGRQFSDPEL QKDLKALPFL VTEGPDGYPL
101: IHAHYLGEMR TFTPTQVVGM VFSDLKTIAE KNLNAAVVDC CIGIPVYFTD LQRRAVMDAA TIAGLHPLHL IHETTATALA YGIYKTDLPE NDQLNVAFVD
201: VGHASLQVCI AGFKKGQLKI LAHSFDRNLG GRDFDEALFH HFAAKFKEEY KIDVLQNAKA CIRLRAACEK LKKVLSANPE APLNIECLMD EKDVRGYIKR
301: DEFEQISIPI LERVKKPLEK ALAEAGLTTE NIHAVEVVGS SSRVPAIMRI LTEFFGKEPR RTMNASECVA KGTALQCAIL SPTFKVREFK VNESFPFSIA
401: LSWKGPSPDA QNGEHHQSTI VFPKGNPIPS VKALTFYRSG TFTTDVQYAD VSELQAPAKI STYTIGPFQS SKGERAKLKV KVRLTLHGIV SVESATLLEE
501: EEVDVPVVKE TAKGPARMET DEGSADAAPS TTSENDVNME DAKGAAAASG AENGVPESGD EPVQMESDAK VEAPKKKVKK TSVPVTEIVY GAMAAADVQK
601: AVEKEFEMAL QDRVMEETKD KKNAVESYVY DMRNKLSDKY QEFVTDSERE QFMAVLQEVE DWLYDDGEDE TKGVYIAKLE ELKKQGDPIE QRYKEYTERG
701: PVSDQFIYCI NSYREAAVSS DPKFDHIDLA EKQKVLNECV EAEAWFREKK QQQDALSKYA NPVLLSADVR KKAEALDSVP ATFRQQRYRV SWYTKAWTNE
801: KVCRPIMTKP KPAKPATPET PSPQPPQGGE QQPQGAASPN ATEGASADSE VPPAGEPMET DKSETLPSAS

Best Arabidopsis Sequence Match ( AT1G79930.1 )
(BLAST)

001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK
801: GGEQADEGKS EPEQPASAEP METENPAEGS T

Arabidopsis Description

HSP70-14Heat shock 70 kDa protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.