Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- endoplasmic reticulum 2
- cytosol 2
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G422600.1 | Wheat | endoplasmic reticulum | 51.08 | 39.85 |
| TraesCS2A01G107900.1 | Wheat | vacuole | 30.57 | 35.88 |
| Os01t0517900-00 | Rice | cytosol | 19.13 | 27.4 |
| TraesCS2D01G108000.1 | Wheat | endoplasmic reticulum | 31.36 | 24.92 |
| PGSC0003DMT400077358 | Potato | cytosol | 19.53 | 17.28 |
| PGSC0003DMT400080588 | Potato | cytosol | 22.49 | 13.43 |
| PGSC0003DMT400041135 | Potato | extracellular | 22.88 | 13.03 |
| PGSC0003DMT400080580 | Potato | cytosol | 22.09 | 12.87 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400050462 | EnsemblPlantsGene:PGSC0003DMG400019608 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | PANTHER:PTHR19375 | PANTHER:PTHR19375:SF317 |
| PFAM:PF00012 | PGSC:PGSC0003DMG400019608 | PRINTS:PR00301 | ScanProsite:PS00329 | ScanProsite:PS01036 | SEG:seg |
| SUPFAM:SSF53067 | UniParc:UPI000295D152 | UniProt:M1BQB7 | MapMan:35.1 | : | : |
Description
Heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019608]
Coordinates
chr6:+:38434789..38443085
Molecular Weight (calculated)
56609.2 Da
IEP (calculated)
4.844
GRAVY (calculated)
-0.765
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQNYLFDRF EDKEVQRDMK LVPYKIVNKD GNPYTQGKIK DEENKVFSPE EISAMILTKM KETTEPYLGK KINDAVVTIP RQATKDAGVI AGLNVARIIN
101: ESTAAAIAYG LDKKGGEKSV LVFDLGGGTF DVSILTIDNG VFEVLATNGD THLGGEDFDH RIMEYFIKLI KKKHGKDISK DNRALCKLRR EAERDKRSLS
201: SQHQVRVEIE SLFDGVDFSE PLTRAHFEEL NNDLFRKTMG PVKKAMEDVG LGKNQIDEIV LVGGSTRIPK VQQLLKDYFD GKEPSKGVNP DEVVAYCEVC
301: GSGTHETEQC EANPDSVNYV GNAQMSGVQQ NYGNTYNPSW KNHPNFSWGG NQNQNQTQGV NQYRSQGVGQ QYYNSNQGSN SSAPKGGMTN EELLQKLITE
401: IGTQLNARID KQDENIRNIQ MSQMSLEKQV AQVANSLNLR PQGGFPGDTE PNPKRLHAVS TRSWLQLEEL APKKRDTEHS LNDDEEDDAV DEEANALMAF
501: DQDDSQA
101: ESTAAAIAYG LDKKGGEKSV LVFDLGGGTF DVSILTIDNG VFEVLATNGD THLGGEDFDH RIMEYFIKLI KKKHGKDISK DNRALCKLRR EAERDKRSLS
201: SQHQVRVEIE SLFDGVDFSE PLTRAHFEEL NNDLFRKTMG PVKKAMEDVG LGKNQIDEIV LVGGSTRIPK VQQLLKDYFD GKEPSKGVNP DEVVAYCEVC
301: GSGTHETEQC EANPDSVNYV GNAQMSGVQQ NYGNTYNPSW KNHPNFSWGG NQNQNQTQGV NQYRSQGVGQ QYYNSNQGSN SSAPKGGMTN EELLQKLITE
401: IGTQLNARID KQDENIRNIQ MSQMSLEKQV AQVANSLNLR PQGGFPGDTE PNPKRLHAVS TRSWLQLEEL APKKRDTEHS LNDDEEDDAV DEEANALMAF
501: DQDDSQA
001: MIFIKENTAK MTRNKAIACL VFLTALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA AKNQAAKNPE
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
101: RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ RQATKDAGAI
201: AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK DHKALGKLRR
301: ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD GKEPSKGTNP
401: DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE LGKFDLTGIL
501: PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD KEKLAKKISD
601: EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
Arabidopsis Description
MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.