Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050462 | Potato | cytosol | 39.85 | 51.08 |
| TraesCS2D01G108000.1 | Wheat | endoplasmic reticulum | 49.23 | 50.16 |
| TraesCS5D01G070100.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 28.62 | 41.89 |
| TraesCS4D01G338600.1 | Wheat | endoplasmic reticulum, golgi | 25.85 | 36.84 |
| TraesCS4D01G338300.1 | Wheat | endoplasmic reticulum | 24.62 | 35.4 |
| TraesCS7D01G455000.1 | Wheat | endoplasmic reticulum, golgi | 23.54 | 34.46 |
| TraesCS4D01G243000.1 | Wheat | cytosol | 26.92 | 30.12 |
| TraesCS7D01G455300.2 | Wheat | endoplasmic reticulum, plasma membrane | 11.54 | 28.74 |
| TraesCS7D01G445600.1 | Wheat | cytosol | 24.31 | 21.58 |
| TraesCS1D01G121000.1 | Wheat | cytosol | 26.46 | 20.6 |
| TraesCS1D01G121200.3 | Wheat | cytosol, golgi, unclear | 26.62 | 20.55 |
| TraesCS6D01G257000.1 | Wheat | endoplasmic reticulum | 25.38 | 18.73 |
Protein Annotations
| Gene3D:1.20.1270.10 | Gene3D:2.60.34.10 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | MapMan:35.1 | ncoils:Coil |
| InterPro:HSP70_C_sf | InterPro:HSP70_peptide-bd_sf | InterPro:Heat_shock_70_CS | InterPro:Hsp_70_fam | InterPro:IPR029047 | InterPro:IPR029048 |
| PFAM:PF00012 | PRINTS:PR00301 | ScanProsite:PS00297 | ScanProsite:PS00329 | ScanProsite:PS01036 | PANTHER:PTHR19375 |
| PANTHER:PTHR19375:SF317 | SUPFAM:SSF100920 | SUPFAM:SSF100934 | SUPFAM:SSF53067 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS7D01G422600 | EnsemblPlants:TraesCS7D01G422600.1 | TIGR:cd10241 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7D:-:543057663..543059615
Molecular Weight (calculated)
71639.2 Da
IEP (calculated)
5.121
GRAVY (calculated)
-0.384
Length
650 amino acids
Sequence
(BLAST)
(BLAST)
001: MARAASMWML ATLVAALLLA IPAASAAAPT EGGSTGTVIG IDLGTTYSCV GVYRNGRVEI IANDQGNRIT PSWVAFTDGG ERLIGEAAKN QAAANPERTI
101: YDAKRLIGRD FADAVVQRDI KLLPYSVVDR NGKPHVQVQV KDGDVRVFSP EEVSAMVLTR MKETAEAYLG EKVTHAVVTV PAYFNDAQRQ ATKDAGVIAG
201: RNVIRIVNEP TAAAIAYGID EKGPEKNVLV FDLGGGTFDV SVLSIDNGVF EVLATNGDTH LGGEDFDQRL MDYFIKLIKR KHGRDIAGDL RALGKLRREC
301: ERAKRALSNQ YQVRVEIESL FDGVDFSEPL TRARFEELNN DLFRKTMVPV KKAMADAGLN KADIDEIVLV GGSTRIPKVQ QLLKDYFNGK EPNKGVNPDE
401: AVAYGAAVQA SIVSGHVDEN TKTMILLDVA PLTLGMETVG GVMTKLIPRN TVVPTKKTQV FTTYQDKQTI VSIKVYEGER SMTKDNRLLG KFDLSGIPPS
501: PRGTPQLEVT FDVDVNGILH VKAADKGTGK SEKITITNED RRHSQEDIDR MVREAEEFAE ADHKLKERVD ARNKLETYVY SIKNTVDSKM ADAMERDEKE
601: KVQDALREVN EWLDDNTEAE KEDYDEKLRE MEDVCNPIIT SRKTTFSTGS
101: YDAKRLIGRD FADAVVQRDI KLLPYSVVDR NGKPHVQVQV KDGDVRVFSP EEVSAMVLTR MKETAEAYLG EKVTHAVVTV PAYFNDAQRQ ATKDAGVIAG
201: RNVIRIVNEP TAAAIAYGID EKGPEKNVLV FDLGGGTFDV SVLSIDNGVF EVLATNGDTH LGGEDFDQRL MDYFIKLIKR KHGRDIAGDL RALGKLRREC
301: ERAKRALSNQ YQVRVEIESL FDGVDFSEPL TRARFEELNN DLFRKTMVPV KKAMADAGLN KADIDEIVLV GGSTRIPKVQ QLLKDYFNGK EPNKGVNPDE
401: AVAYGAAVQA SIVSGHVDEN TKTMILLDVA PLTLGMETVG GVMTKLIPRN TVVPTKKTQV FTTYQDKQTI VSIKVYEGER SMTKDNRLLG KFDLSGIPPS
501: PRGTPQLEVT FDVDVNGILH VKAADKGTGK SEKITITNED RRHSQEDIDR MVREAEEFAE ADHKLKERVD ARNKLETYVY SIKNTVDSKM ADAMERDEKE
601: KVQDALREVN EWLDDNTEAE KEDYDEKLRE MEDVCNPIIT SRKTTFSTGS
001: MIFIKENTAK MTRNKAIACL VFLTVLDFLM NIGAALMSSL AIEGEEQKLG TVIGIDLGTT YSCVGVYHNK HVEIIANDQG NRITPSWVAF TDTERLIGEA
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
101: AKNQAAKNPE RTIFDPKRLI GRKFDDPDVQ RDIKFLPYKV VNKDGKPYIQ VKVKGEEKLF SPEEISAMIL TKMKETAEAF LGKKIKDAVI TVPAYFNDAQ
201: RQATKDAGAI AGLNVVRIIN EPTGAAIAYG LDKKGGESNI LVYDLGGGTF DVSILTIDNG VFEVLSTSGD THLGGEDFDH RVMDYFIKLV KKKYNKDISK
301: DHKALGKLRR ECELAKRSLS NQHQVRVEIE SLFDGVDFSE PLTRARFEEL NMDLFKKTME PVKKALKDAG LKKSDIDEIV LVGGSTRIPK VQQMLKDFFD
401: GKEPSKGTNP DEAVAYGAAV QGGVLSGEGG EETQNILLLD VAPLSLGIET VGGVMTNIIP RNTVIPTKKS QVFTTYQDQQ TTVTINVYEG ERSMTKDNRE
501: LGKFDLTGIL PAPRGVPQIE VTFEVDANGI LQVKAEDKVA KTSQSITITN DKGRLTEEEI EEMIREAEEF AEEDKIMKEK IDARNKLETY VYNMKSTVAD
601: KEKLAKKISD EDKEKMEGVL KEALEWLEEN VNAEKEDYDE KLKEVELVCD PVIKSVYEKT EGENEDDDGD DHDEL
Arabidopsis Description
MED37BProbable mediator of RNA polymerase II transcription subunit 37b [Source:UniProtKB/Swiss-Prot;Acc:Q8H1B3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.