Factsheet for TraesCS6D01G257000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G276700.1	Wheat	endoplasmic reticulum, unclear	98.75	98.19
TraesCS6B01G304200.1	Wheat	golgi	98.52	97.97
HORVU2Hr1G036440.8	Barley	cytosol	11.35	97.09
HORVU6Hr1G001950.1	Barley	cytosol	20.32	89.05
HORVU1Hr1G077070.2	Barley	cytosol	24.06	87.97
HORVU1Hr1G040940.1	Barley	cytosol	11.69	83.06
Zm00001d051607_P004	Maize	endoplasmic reticulum	83.09	81.42
KXG30896	Sorghum	endoplasmic reticulum	78.21	74.25
Zm00001d017809_P002	Maize	plasma membrane	77.53	73.68
Zm00001d051609_P004	Maize	cytosol	38.93	73.45
GSMUA_Achr10P...	Banana	endoplasmic reticulum	68.1	66.96
GSMUA_Achr6P09420_001	Banana	endoplasmic reticulum	67.08	66.18
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	65.49	64.47
CDY32270	Canola	cytosol, mitochondrion, plastid	57.21	63.96
Solyc07g043560.2.1	Tomato	plastid	64.47	63.82
CDX90500	Canola	endoplasmic reticulum	62.88	63.75
CDY40516	Canola	cytosol	60.39	63.71
Bra012696.1-P	Field mustard	endoplasmic reticulum	62.77	63.64
PGSC0003DMT400041135	Potato	extracellular	64.02	63.37
CDY60712	Canola	endoplasmic reticulum	62.43	63.29
AT4G16660.2	Thale cress	endoplasmic reticulum, mitochondrion	63.34	62.63
KRH17619	Soybean	endoplasmic reticulum	62.66	61.95
Bra038496.1-P	Field mustard	endoplasmic reticulum	59.36	61.82
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	65.49	61.78
KRG90078	Soybean	endoplasmic reticulum	62.09	61.25
KRH51336	Soybean	cytosol	38.14	60.98
VIT_04s0043g00710.t01	Wine grape	cytosol	45.52	54.19
TraesCS7D01G445600.1	Wheat	cytosol	23.61	28.42
TraesCS7D01G422600.1	Wheat	endoplasmic reticulum	18.73	25.38
TraesCS1D01G121000.1	Wheat	cytosol	23.38	24.67
TraesCS1D01G121200.3	Wheat	cytosol, golgi, unclear	23.27	24.35
TraesCS5D01G070100.1	Wheat	endoplasmic reticulum, extracellular, golgi	10.9	21.62
TraesCS2D01G108000.1	Wheat	endoplasmic reticulum	15.44	21.32
TraesCS4D01G338600.1	Wheat	endoplasmic reticulum, golgi	10.33	19.96
TraesCS7D01G455000.1	Wheat	endoplasmic reticulum, golgi	9.99	19.82
TraesCS4D01G338300.1	Wheat	endoplasmic reticulum	9.99	19.47
TraesCS4D01G243000.1	Wheat	cytosol	11.35	17.21
TraesCS7D01G455300.2	Wheat	endoplasmic reticulum, plasma membrane	4.88	16.48

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.5	Gene3D:2.60.34.10	Gene3D:3.30.420.40	Gene3D:3.90.640.10	ncoils:Coil
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF320	SUPFAM:SSF100934
SUPFAM:SSF53067	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G257000	EnsemblPlants:TraesCS6D01G257000.1	TIGR:cd10230
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:363054717..363060760

Molecular Weight (calculated)

97054.7 Da

IEP (calculated)

5.503

GRAVY (calculated)

-0.440

Length

881 amino acids

Sequence
(BLAST)

001: MAPRLLLLAL VAAAVAVPPA SAAVASIDLG SEWLKVAAVH LAPGRAPIAV AINEMSKRKS PALAALADGN RLAGEEAAGI TARHPAKVFS RMRDLLAKPF
101: PYARALADSL FLPYDLVQDA RGAAAVRADD GQVYTVEEIV AMVLHYASGI ADAHVGLPVR DAVVAVPPYF GQAERRALTQ AAQLAGFNVL ALVNEHAGAA
201: LQYGIDKDFS NESRHVIFYD MGSGSTYAAL VYYSSYSAKE FGKTVSVNQF QVKDVRWNSK LGGLEMEMRL VNYFADQFNK QLGNGDDIRQ SPKAMAKLKK
301: QVKRTKEILS ANTAAPISVE SLYNDIDFRS TITREKFEEL CADLWEQALT PIKDVLTHSG MKIGDIYAVE LIGGATRVPK LQSKLQEFLG RSELDKHLDA
401: DEAIVLGASL HAANLSDGIK LNRKLGMIDG STYGFVFEID GPDYVKDEST DQVLVPRMKK MPIKLFRSIR HTKDFDVSLS YDKASELPPG VSSHKFAEYA
501: ISGLTETSEK YGSRNLSAPI KANLHFSLSR SGIISLDRAE AVIEITEWVE VPKKNVTLET NTTDETLSAE SGTTDSKENS SSGSDADNSS TTNDESNVQD
601: TITEKVLKKR TFRVPLKVTE KTAGPASTLS KELYSEAKSR LDVLNKKDAE RRRTAELKNN LESYIYSMKE KLEESTDMLA VSTEQERESF TAKLSEVQDW
701: LYMDGEEAQA NEFQERLDQL KAMGDPILFR MSELKARPAA CGSARLYLTE LQKIVKNWDT SKPWLPKKRV DEVVSEADKL KTWLEEKEAL QKSTPVHSSP
801: AFTSEEVYQK VLALQNKVSS VNRIPKPKPK VEKKPAKEEA NKEKTDSSES ASSESESTEK PSESDAPEKN NDSEPESHDE L

Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)

001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL

Arabidopsis Description

heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.