Factsheet for VIT_04s0008g04410.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	94.53	90.58
HORVU2Hr1G036440.8	Barley	cytosol	9.16	79.61
VIT_04s0043g00710.t01	Wine grape	cytosol	63.58	76.89
HORVU6Hr1G001950.1	Barley	cytosol	16.54	73.63
HORVU1Hr1G040940.1	Barley	cytosol	10.06	72.58
KRH17619	Soybean	endoplasmic reticulum	71.4	71.72
PGSC0003DMT400041135	Potato	extracellular	70.39	70.79
CDY32270	Canola	cytosol, mitochondrion, plastid	62.12	70.56
KRG90078	Soybean	endoplasmic reticulum	70.39	70.55
CDX90500	Canola	endoplasmic reticulum	68.38	70.43
Bra012696.1-P	Field mustard	endoplasmic reticulum	68.27	70.31
CDY60712	Canola	endoplasmic reticulum	68.27	70.31
KRH51336	Soybean	cytosol	43.24	70.24
Solyc07g043560.2.1	Tomato	plastid	69.83	70.22
AT4G16660.2	Thale cress	endoplasmic reticulum, mitochondrion	69.5	69.81
CDY40516	Canola	cytosol	65.03	69.7
Bra038496.1-P	Field mustard	endoplasmic reticulum	65.47	69.27
GSMUA_Achr6P09420_001	Banana	endoplasmic reticulum	69.05	69.2
GSMUA_Achr10P...	Banana	endoplasmic reticulum	68.94	68.86
HORVU1Hr1G077070.2	Barley	cytosol	17.99	66.81
TraesCS6A01G276700.1	Wheat	endoplasmic reticulum, unclear	64.92	65.58
TraesCS6D01G257000.1	Wheat	endoplasmic reticulum	64.47	65.49
TraesCS6B01G304200.1	Wheat	golgi	64.8	65.46
Zm00001d051607_P004	Maize	endoplasmic reticulum	65.36	65.07
TraesCS1B01G206700.1	Wheat	cytosol	17.21	62.1
Zm00001d017809_P002	Maize	plasma membrane	62.01	59.87
KXG30896	Sorghum	endoplasmic reticulum	61.79	59.59
Zm00001d051609_P004	Maize	cytosol	29.61	56.75
VIT_09s0002g04680.t01	Wine grape	cytosol	23.91	25.24
VIT_19s0090g00340.t01	Wine grape	cytosol	21.23	24.64
VIT_07s0005g06650.t01	Wine grape	cytosol	3.24	24.17
VIT_05s0020g03330.t01	Wine grape	cytosol	11.28	17.44

Protein Annotations

Gene3D:1.20.1270.10	EntrezGene:100254281	wikigene:100254281	MapMan:19.1.1.2.5	Gene3D:2.60.34.10	Gene3D:3.30.30.30
Gene3D:3.30.420.40	Gene3D:3.90.640.10	ProteinID:CCB46753	ProteinID:CCB46753.1	UniProt:F6H3G5	EMBL:FN595231
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	EntrezGene:LOC100254281	wikigene:LOC100254281
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF320	SUPFAM:SSF100934
SUPFAM:SSF53067	SignalP:SignalP-noTM	UniParc:UPI00015C8D8B	ArrayExpress:VIT_04s0008g04410	EnsemblPlantsGene:VIT_04s0008g04410	EnsemblPlants:VIT_04s0008g04410.t01
RefSeq:XP_002281944	RefSeq:XP_002281944.1	RefSeq:XP_010648569.1	RefSeq:XP_010648570.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:-:3800929..3812026

Molecular Weight (calculated)

99555.9 Da

IEP (calculated)

5.165

GRAVY (calculated)

-0.466

Length

895 amino acids

Sequence
(BLAST)

001: MNPFFRLGIF LSLLLLIPTP AQSAVSSIDL GSEWVKVAVV NLKPGQSPIS VAINEMSKRK SPALVAFQSG NRLIGEEAAG IVARYPDKVF SFIRDMIGKP
101: YNKIQDFLAK MYLPYSIVED YRGTAAIRVD DGTVYSLEEL EAMILSYAIK LAEFHSKVPV KDAVIAVPPY LGQAERRGLL TAAQLAGVNV LALINEHSGV
201: ALQYGIDKDF SNGSRHVVFY DMGSSSTYAA LVYFSAYNAK EYGKTVSVNQ FQVKDVIWDP ELGGQNMEIR LVEYFADEFN KQVGNGVDVR KFPKAMAKLK
301: KQVKRTKEIL SANTVAPISV ESLYDDRDFR STITREKFEE LCEDLWERSL IPAKEVLKNS GLKVDEIYAV ELIGGATRVP KLQAKLQEFL GRKDLDRHLD
401: ADEAIVLGAA LHAANLSDGI KLNRKLGMVD GSLYGLVVEL DGPGLLKDES TRQLIVPRMK KLPSKMFRSI IHDKDFDVSF SYENEDLLPP GVSSPRFAQY
501: AVSGLADASA KYSSRNLSSP IKANLHFSLS RSGILSLDRA DAVIEITEWV EVPKVNVTLE NSTTASPNIS VEVSPHNTSE DSNENLHGDG GINNTSNSTE
601: NQSDKDLGTE KKLKKRTFRV PLKVVEKTVG PGMPLSKESI AEAKRKLEAL DKKDAERRRT AELKNNLEGY IYTTKEKLES SEELEKISTT QERQSFIEKL
701: DEVQEWLYTD GEDATAAEFQ ERLDLLKSIG DPIFFRLTEL TARPAAMEDA RKYLGQLNQI VQDWETKKPW LLKDKIDEVL SDGDKVKNWL EEKEAEQKKS
801: SGFSTPAFTS DEVYEKIFKF QEKVASINRI PKPKPKIEKP PKKETENNGA SSEEKANASN STSEKTPSSQ NDQSAAGDSD GKPNEEAEGD AHDEL

Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)

001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL

Arabidopsis Description

heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.