Factsheet for Solyc07g043560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plastid: 20363867
plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041135	Potato	extracellular	96.29	96.29
HORVU2Hr1G036440.8	Barley	cytosol	9.44	81.55
HORVU6Hr1G001950.1	Barley	cytosol	17.19	76.12
HORVU1Hr1G040940.1	Barley	cytosol	10.22	73.39
VIT_04s0008g04410.t01	Wine grape	endoplasmic reticulum	70.22	69.83
HORVU1Hr1G077070.2	Barley	cytosol	18.31	67.63
VIT_09s0096g00090.t01	Wine grape	endoplasmic reticulum, plastid	70.34	67.02
KRH17619	Soybean	endoplasmic reticulum	66.63	66.55
KRG90078	Soybean	endoplasmic reticulum	66.74	66.52
CDX90500	Canola	endoplasmic reticulum	64.72	66.28
Bra012696.1-P	Field mustard	endoplasmic reticulum	64.61	66.17
CDY60712	Canola	endoplasmic reticulum	64.16	65.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum	66.07	65.62
CDY32270	Canola	cytosol, mitochondrion, plastid	57.98	65.48
AT4G16660.2	Thale cress	endoplasmic reticulum, mitochondrion	65.51	65.43
CDY40516	Canola	cytosol	61.12	65.15
KRH51336	Soybean	cytosol	40.22	64.97
GSMUA_Achr6P09420_001	Banana	endoplasmic reticulum	64.94	64.73
Bra038496.1-P	Field mustard	endoplasmic reticulum	61.35	64.54
TraesCS6D01G257000.1	Wheat	endoplasmic reticulum	63.82	64.47
TraesCS6B01G304200.1	Wheat	golgi	64.04	64.33
TraesCS6A01G276700.1	Wheat	endoplasmic reticulum, unclear	63.93	64.22
Zm00001d051607_P004	Maize	endoplasmic reticulum	64.49	63.85
TraesCS1B01G206700.1	Wheat	cytosol	17.42	62.5
VIT_04s0043g00710.t01	Wine grape	cytosol	48.43	58.24
Zm00001d017809_P002	Maize	plasma membrane	60.34	57.93
KXG30896	Sorghum	endoplasmic reticulum	60.22	57.76
Zm00001d051609_P004	Maize	cytosol	30.11	57.39
Solyc02g080470.2.1	Tomato	cytosol	23.15	27.36
Solyc12g043120.1.1	Tomato	extracellular	23.71	24.94
Solyc12g043110.1.1	Tomato	plastid	23.37	24.41
Solyc09g075950.1.1	Tomato	plastid	12.13	18.75

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.5	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	Gene3D:3.90.640.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf
InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:K4CEL3	PFAM:PF00012
PRINTS:PR00301	ScanProsite:PS01036	PANTHER:PTHR19375	PANTHER:PTHR19375:SF320	SUPFAM:SSF100934	SUPFAM:SSF53067
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc07g043560.2	EnsemblPlants:Solyc07g043560.2.1	UniParc:UPI000276C5D8	SEG:seg	:

Description

Heat shock 70 kDa protein 17 [Source:Projected from Arabidopsis thaliana (AT4G16660) UniProtKB/Swiss-Prot;Acc:F4JMJ1]

Coordinates

chr7:-:57457649..57465996

Molecular Weight (calculated)

98792.5 Da

IEP (calculated)

6.189

GRAVY (calculated)

-0.544

Length

890 amino acids

Sequence
(BLAST)

001: MPAKNMLFHI GIILSLFLLN PIPSQSAVSS IDLGSEWFKV AVVNLKPGQP PISIAINEMS KRKTPSLVAF HSESRLIGEE ASGIVARYPN KVYSHLRDLI
101: SKPFPHVSKT LGSLYLTYDI SPEESRNVAV FKTENGNFTA EELVAMLFKY ALGLAEAHTR GTPVKDAVVT VPPYMGVAER KGLLVAAELA GINVLALVNE
201: HSGAALQYGI DKDFSNGSRH VIFYDMGAGS TYAALVYFSA YNTKEFGKTV SANQFQVKDV RWNAELGGEH MELRLVEHFA DEFNKQVGNG VDIRKSPKAM
301: AKLKKQVKRT KEILSANTAA PISVESIYDD RDFRSSITRE KFEELCADLW EKALVPLKEV LTHSGLKIED IYAVELIGGA TRVPKLQAKL QEFLGRKELD
401: RHLDSDEAIA LGASLHAANI SDGIKLNRKL GMIDGSPYGY VIEVDGPDLP KDESTKQLTI PRMKKLPSKM FRSIVHKKDF EVSLAYESDD FLPPGTTSRT
501: FAQYAVSGLT DASEKYASRN LSAPVKANLH FSLSRSGIFS LDRADAVIEI TEWVEVPVKN LTVDNSTSAS ANTSTESGPS NTEESDEKLN PDIVNSNTSD
601: SGANDSSTIS PVTEKKLKKR TFRVPLKIDE KTAGPGAPLS KESFSEAKSK LEALDKKDEE RRRTAELKNS LEGYIYDTRD KLESGDFVTI STSQERQSFI
701: QKLDEVQEWL YTDGEDASAK QFQEHLDKLK AIGDPIFFRH KELAARPASS DHARKYLNEV QQIVRGWETN KSWLPKGKID EVLNESEKVK NWLNQKEAEQ
801: KNTPGSDKPA FTSEEVYVKV FDLQDKVNKV NKIPKPKPKV EKPLKNETEN SKEKADTTKS SSEEGTSQKE QTASEAEKPS ADENSDHDEL

Best Arabidopsis Sequence Match ( AT4G16660.1 )
(BLAST)

001: MGKIFSWLVV LLSLISLVPV PSESAVLSVD LGSEWVKVAV VNLKRGQSPI SVAINEMSKR KSPALVAFQS GDRLLGEEAA GITARYPNKV YSQLRDMVGK
101: PFKHVKDFID SVYLPFDIVE DSRGAVGIKI DDGSTVYSVE ELLAMILGYA SNLAEFHAKI PVKDMVVSVP PYFGQAERRG LIQASQLAGV NVLSLVNEHS
201: GAALQYGIDK DFANGSRHVI FYDMGSSSTY AALVYYSAYS EKEYGKTVSV NQFQVKDVRW DLGLGGQSME MRLVEHFADE FNKQLGNGVD VRKFPKAMAK
301: LKKQVKRTKE ILSANTAAPI SVESLHDDRD FRSTITREKF EELCKDLWER SLTPLKDVLK HSGLKIDDIS AVELIGGATR VPKLQSTIQE FIGKQQLDKH
401: LDADEAIVLG SALHAANLSD GIKLKRRLGI VDGSPYGFLV ELEGPNVKKD ESTKQQLVPR MKKLPSKMFR SFVLDKDFDV SLAYESEGIL PPGTTSPVFA
501: QYSVSGLADA SEKYSSRNLS APIKANLHFS LSRSGILSLD RGDAVIEITE WVDVPKKNVT IDSNTTTSTG NATDENSQEN KEDLQTDAEN STASNTTAEE
601: PAVASLGTEK KLKKRTFRIP LKVVEKTVGP GAPFSKESLA EAKIKLEALD KKDRERRRTA ELKNNLESYI YATKEKLETP EFEKISTQEE RKAFVEKLDE
701: VQDWLYMDGE DANATEFEKR LDSLKAIGSP ISFRSEELTA RPVAIEYARK YLTELKEIIK EWETNKTWLP KEKIDEVSKE AEKVKSWLDK NVAEQEKTSL
801: WSKPVFTSTE VYAKVFTLQD KVTKVNKIPK PKPKIEKVTK TENTTKEEEQ SKSSDEAAKE EESHDEL

Arabidopsis Description

heat shock protein 70 (Hsp 70) family protein [Source:TAIR;Acc:AT4G16660]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.