Factsheet for Solyc12g043110.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117
plastid: 26371478
endoplasmic reticulum: 29145071
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080588	Potato	cytosol	98.36	98.7
Solyc12g043120.1.1	Tomato	extracellular	93.54	94.21
VIT_09s0002g04680.t01	Wine grape	cytosol	81.69	82.08
KRH09848	Soybean	endoplasmic reticulum, nucleus	81.57	80.53
KRH23474	Soybean	endoplasmic reticulum	81.1	80.07
Bra039679.1-P	Field mustard	cytosol	75.82	78.97
CDX76065	Canola	cytosol	75.23	78.75
Bra014713.1-P	Field mustard	cytosol	75.0	78.5
AT1G79930.1	Thale cress	cytosol	76.41	78.34
GSMUA_Achr7P09800_001	Banana	cytosol	76.64	76.64
KRH44373	Soybean	cytosol, endoplasmic reticulum, nucleus	75.47	75.47
KRH47052	Soybean	cytosol, endoplasmic reticulum	75.82	75.38
GSMUA_Achr5P06230_001	Banana	cytosol	75.23	75.32
CDY24089	Canola	endoplasmic reticulum, extracellular	75.82	75.29
GSMUA_Achr2P15830_001	Banana	cytosol	74.41	74.85
GSMUA_Achr2P19660_001	Banana	cytosol	74.06	74.32
AT1G79920.2	Thale cress	cytosol	63.5	73.51
Os01t0180800-01	Rice	plasma membrane	72.65	73.25
EES17815	Sorghum	cytosol	71.95	72.8
HORVU1Hr1G026840.3	Barley	cytosol	70.66	72.1
EES19148	Sorghum	cytosol	71.95	72.03
Zm00001d009948_P004	Maize	cytosol	70.42	72.03
Zm00001d037700_P002	Maize	cytosol	71.01	71.94
CDY43337	Canola	cytosol	75.0	71.88
TraesCS1D01G121000.1	Wheat	cytosol	70.31	71.74
TraesCS1A01G120100.4	Wheat	cytosol	70.31	71.74
TraesCS1B01G139600.1	Wheat	cytosol, golgi	70.89	71.73
TraesCS1B01G139500.1	Wheat	cytosol	69.95	71.63
TraesCS1D01G121200.3	Wheat	cytosol, golgi, unclear	70.77	71.62
TraesCS1A01G120200.1	Wheat	cytosol	70.66	71.58
HORVU1Hr1G027420.5	Barley	cytosol	69.37	70.95
Zm00001d037717_P002	Maize	plastid	69.01	69.75
Zm00001d009950_P002	Maize	cytosol	70.07	69.5
Zm00001d025053_P001	Maize	cytosol	19.25	68.62
Zm00001d048458_P006	Maize	cytosol	19.13	68.2
Os05t0181000-01	Rice	plasma membrane	67.96	67.88
CDY45119	Canola	extracellular	75.23	67.05
CDY32364	Canola	cytosol	19.95	58.62
CDY32367	Canola	cytosol, mitochondrion, plastid	19.6	57.0
CDY67465	Canola	cytosol	18.08	55.2
Solyc02g080470.2.1	Tomato	cytosol	47.54	53.78
TraesCS3B01G298400.1	Wheat	cytosol	23.83	32.27
Solyc07g043560.2.1	Tomato	plastid	24.41	23.37
Solyc09g075950.1.1	Tomato	plastid	13.85	20.49

Protein Annotations

Gene3D:1.20.1270.10	MapMan:19.1.1.2.1.1	MapMan:19.1.5.3	Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40
Gene3D:3.90.640.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
InterPro:HSP70_C_sf	InterPro:HSP70_peptide-bd_sf	InterPro:Hsp_70_fam	InterPro:IPR029047	InterPro:IPR029048	UniProt:K4DF99
PFAM:PF00012	PRINTS:PR00301	PANTHER:PTHR19375	PANTHER:PTHR19375:SF322	SUPFAM:SSF100920	SUPFAM:SSF100934
SUPFAM:SSF53067	EnsemblPlantsGene:Solyc12g043110.1	EnsemblPlants:Solyc12g043110.1.1	UniParc:UPI0002769448	SEG:seg	:

Description

No Description!

Coordinates

chr12:+:39110693..39115806

Molecular Weight (calculated)

93887.8 Da

IEP (calculated)

4.978

GRAVY (calculated)

-0.382

Length

852 amino acids

Sequence
(BLAST)

001: MSVVGFDFGN ESGVVAVARQ RGIDVVLNDE SKRETPAIVC FGEKQRFLGT AGAASSMMNP KNTISQIKRL IGRQFSDPEL QRDIKTLPFL VTEGPDGYPL
101: IHARYLGEVR TFTPTQILGM VFSDLKTIAE KNLNAVVVDC CIGIPIYFTD LQRRAVMDAA TIAGLHPLHL IHETTATALA YGIYKTDLPE NDPLNVAFVD
201: VGHASLQVCI AGFKKGELKI LAHSFDRNLG GRDFDEAIFQ HFAAKFKEEY KIDVYQNARA CIRLRAACEK LKKVLSANPE APLNIECLMD EKDVRGFLKR
301: DEFEQISIPI LERVKKPLEK ALAEAGLTTE NIHAVEVIGS SSRVPAIMRI LTEFFGKEPR RTMNASECVA KGAALQCAIL SPTFKVREFK VNESFPFPIA
401: LSWKGPAPDA QNGALENHQS TIVFPKGNPI PSVKALTFYR SGTFTIDVQY ADVSELQAPA KISTYTIGPF QSMKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVV KETAKEPAKM ETDESSVNAA PSTTAESDVN MQDAKGAAAA SGAENGVPES GDKPVQMETD AKVEAPKKKV KKTSVPVTEI VYGAMAAADV
601: QKAVEKEFEM ALQDRVMEET KDKKNAVESY VYDMRNKLSD KYQEFVTDSE REQFMAVLQE VEDWLYEDGE DETKGVYIAK LEELKKQGDP IEQRYKEYTE
701: RGPVIDQFIY CINSYREAAV SSDPKFDHID LADKQKVLNE CVEAEAWFRE KKQQQDALPK YANPVLLSAD VRKKAEALDR VCRPIMTKPK PAKPATPETP
801: PPQSPQGGEQ QPPSAESPDA GNATEGASVG SEVPLAAEPM ETDKSETAPS AS

Best Arabidopsis Sequence Match ( AT1G79930.1 )
(BLAST)

001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK
801: GGEQADEGKS EPEQPASAEP METENPAEGS T

Arabidopsis Description

HSP70-14Heat shock 70 kDa protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.