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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • golgi 4
  • extracellular 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
 extracellular: 29364282
msms PMID: 29364282 doi
S Pahlow, A Ostendorp, L Krüßel, J Kehr
Molecular Plant Genetics, Universität Hamburg., Molecular Plant Genetics, Universität Hamburg; julia.kehr@uni-hamburg.de.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76065 Canola cytosol 82.53 96.93
CDY24089 Canola endoplasmic reticulum, extracellular 86.51 96.39
CDY43337 Canola cytosol 83.89 90.21
AT1G79930.1 Thale cress cytosol 76.88 88.45
AT1G79920.2 Thale cress cytosol 62.24 80.84
VIT_09s0002g04680.t01 Wine grape cytosol 68.31 77.0
Solyc12g043120.1.1 Tomato extracellular 67.47 76.24
PGSC0003DMT400080588 Potato cytosol 66.95 75.38
Solyc12g043110.1.1 Tomato plastid 67.05 75.23
KRH23474 Soybean endoplasmic reticulum 67.78 75.09
KRH09848 Soybean endoplasmic reticulum, nucleus 67.68 74.97
PGSC0003DMT400080580 Potato cytosol 67.15 73.79
GSMUA_Achr7P09800_001 Banana cytosol 65.48 73.47
KRH44373 Soybean cytosol, endoplasmic reticulum, nucleus 64.64 72.54
GSMUA_Achr5P06230_001 Banana cytosol 64.02 71.92
KRH47052 Soybean cytosol, endoplasmic reticulum 64.23 71.65
GSMUA_Achr2P15830_001 Banana cytosol 63.08 71.19
GSMUA_Achr2P19660_001 Banana cytosol 63.18 71.14
Os01t0180800-01 Rice plasma membrane 62.66 70.89
TraesCS1B01G139500.1 Wheat cytosol 60.88 69.95
TraesCS1A01G120100.4 Wheat cytosol 60.98 69.82
TraesCS1D01G121000.1 Wheat cytosol 60.98 69.82
EES17815 Sorghum cytosol 61.19 69.48
HORVU1Hr1G026840.3 Barley cytosol 60.67 69.46
EES19148 Sorghum cytosol 61.61 69.21
Zm00001d009948_P004 Maize cytosol 60.04 68.91
Zm00001d037700_P002 Maize cytosol 60.46 68.73
Zm00001d048458_P006 Maize cytosol 17.15 68.62
TraesCS1D01G121200.3 Wheat cytosol, golgi, unclear 60.15 68.29
TraesCS1B01G139600.1 Wheat cytosol, golgi 60.04 68.17
HORVU1Hr1G027420.5 Barley cytosol 59.31 68.07
TraesCS1A01G120200.1 Wheat cytosol 59.83 68.01
Zm00001d025053_P001 Maize cytosol 16.95 67.78
Zm00001d037717_P002 Maize plastid 59.41 67.38
Zm00001d009950_P002 Maize cytosol 60.15 66.94
Os05t0181000-01 Rice plasma membrane 59.1 66.24
CDY32364 Canola cytosol 19.98 65.86
CDY32367 Canola cytosol, mitochondrion, plastid 19.98 65.19
CDY67465 Canola cytosol 18.72 64.16
CDY49794 Canola cytosol 40.06 50.33
CDX97975 Canola cytosol 39.96 50.2
CDY03437 Canola cytosol 10.04 36.36
CDY02235 Canola cytosol 7.01 36.22
CDY36723 Canola cytosol 7.22 35.38
CDY16796 Canola cytosol 8.79 35.29
CDY10445 Canola cytosol 8.68 34.58
CDY15421 Canola cytosol 8.68 34.58
CDY40361 Canola cytosol 8.68 34.58
CDY53148 Canola cytosol 9.1 33.98
CDX85038 Canola cytosol 9.1 33.08
CDY04444 Canola mitochondrion 6.17 32.96
CDY16175 Canola cytosol 8.79 32.68
TraesCS3B01G298400.1 Wheat cytosol 21.34 32.43
CDX89754 Canola plastid 7.43 31.7
CDY31804 Canola cytosol 12.45 28.54
CDX90500 Canola endoplasmic reticulum 22.28 24.51
CDY40516 Canola cytosol 21.34 24.43
CDY60712 Canola endoplasmic reticulum 22.18 24.4
CDY32270 Canola cytosol, mitochondrion, plastid 19.87 24.11
CDY12232 Canola cytosol 12.66 21.49
CDY70083 Canola cytosol 12.66 21.45
Protein Annotations
Gene3D:1.20.1270.10MapMan:19.1.1.2.1.1MapMan:19.1.5.3Gene3D:3.30.30.30Gene3D:3.30.420.40Gene3D:3.90.640.10
GO:A0A078I6S9UniProt:A0A078I6S9EnsemblPlants:CDY45119ProteinID:CDY45119ProteinID:CDY45119.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00081406001InterPro:HSP70_C_sfInterPro:HSP70_peptide-bd_sfInterPro:Hsp_70_famInterPro:IPR029047InterPro:IPR029048
PFAM:PF00012PRINTS:PR00301PANTHER:PTHR19375PANTHER:PTHR19375:SF322SUPFAM:SSF100920SUPFAM:SSF100934
SUPFAM:SSF53067TMHMM:TMhelixUniParc:UPI0004EDB5F6SEG:seg::
Description
BnaC06g06400DBnaC06g06400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6S9]
Coordinates
chrLK032614:-:61075..67194
Molecular Weight (calculated)
106322.0 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.253
Length
956 amino acids
Sequence
(BLAST)
001: MIVMFWSRVL IVRLIRSMSS KLSGCFSLHC RLFRLSTTLR FANFILFSIL SLFSHLVASF IVVCWAWKVV YGIKLELWFL GGWLPFSLPQ VVSFLSIFVV
101: LRWHGRLALL CKLLNLKQSS HNPIPSRDPQ GFESRPKLDR MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGEKQRFIGT AGAASTMMNP
201: KNSISQIKRL VGRQFSDPEL QRDIKSLPFS VTEGPDGYPL IHASYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNAAVVDC CIGIPVYFTD LQRRAVLDAA
301: TIAGLHPLHL IHETTATALA YGIYKTDLPE SEPLNVAFID IGHASMQVCI AGFKKGQLKV LSHGFDRSLG GRDFDEVLFN HFATKFKEEY KIDVTQNAKA
401: SLRLRAACEK LKKVLSANPV APLNIECLMD EKDVRGVIKR EEFEEISVPI LERVKRPLEK ALADAGLSVE DVHMVEVVGS GSRVPAIIKI LTEFFGKEPR
501: RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSVS LAWKGAAADA QNGGAENQQS TVVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVTDLQAPA
601: KISTYTIGPF QSSKGERAKV KVKVRLTLHG IVSVESATLL EEEEVEVPVT TEQMDTDKAS GETDVNMQDA KETSDAAGAD NGVTEPADKP VQMETDSKAE
701: APKKKVKKTN VPLSELVYGA LQSVDVQKAV EKEYEMALQD RVMEETKDKK NAVESYVYDM RNKLSDKLHE YITESEREAF LAKLQEVEDW LYEDGEDETK
801: GVYVAKLEEL KKVGDPVEMR YKESQERGTV IGQLGHCVNS YREAAVSNDS NHIELEEKQK VLNECVEAEA WMREKQQQQE ALPKYATPAF LSADVTRKAE
901: ALDKFCRPIM TKPKPVVKPE APPAKAAADE EKSEPQPEAA SGEEPMETEK PTEDSA
Best Arabidopsis Sequence Match ( AT1G79930.1 )
(BLAST)
001: MSVVGFDFGN ENCLVAVARQ RGIDVVLNDE SNRETPAIVC FGDKQRFIGT AGAASTMMNP KNSISQIKRL IGRQFSDPEL QRDIKSLPFS VTEGPDGYPL
101: IHANYLGEKR AFTPTQVMGM MLSNLKGIAE KNLNTAVVDC CIGIPVYFTD LQRRAVLDAA TIAGLHPLRL IHETTATALA YGIYKTDLPE SDQLNVAFID
201: IGHASMQVCI AGFKKGQLKI LSHAFDRSLG GRDFDEVLFN HFAAKFKDEY KIDVSQNAKA SLRLRATCEK LKKVLSANPL APLNIECLMD EKDVRGVIKR
301: EEFEEISIPI LERVKRPLEK ALSDAGLTVE DVHMVEVIGS GSRVPAMIKI LTEFFGKEPR RTMNASECVS RGCALQCAIL SPTFKVREFQ VHESFPFSIS
401: LAWKGAASEA QNGGAENQQS TIVFPKGNPI PSVKALTFYR SGTFSVDVQY SDVNDLQAPP KISTYTIGPF QSSKGERAKL KVKVRLNLHG IVSVESATLL
501: EEEEVEVPVT KEHSEETTKM DSDKASAEAA PASGDCDVNM QDAKDTSDAT GTDNGVPESA EKPVQMETDS KAEAPKKKVK KTNVPLSELV YGALKTVEVE
601: KAVEKEFEMA LQDRVMEETK DRKNAVESYV YDMRNKLSDK YQEYITDSER EAFLANLQEV EDWLYEDGED ETKGVYVAKL EELKKVGDPV EVRYKESLER
701: GSVIDQLGYC INSYREAAMS TDPKFDHIEL AEKQKVLNEC VEAEAWLRGK QQQQDTLPKY ATPALLSADV KSKAEALDKF CRPIMTKPKP VAKAEAPQAK
801: GGEQADEGKS EPEQPASAEP METENPAEGS T
Arabidopsis Description
HSP70-14Heat shock 70 kDa protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.