CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02235	Canola	cytosol	71.09	98.38
CDY16175	Canola	cytosol	98.44	98.05
CDX85038	Canola	cytosol	98.05	95.44
CDY40361	Canola	cytosol	88.67	94.58
CDY15421	Canola	cytosol	88.28	94.17
CDY10445	Canola	cytosol	88.28	94.17
CDY16796	Canola	cytosol	86.33	92.86
CDY36723	Canola	cytosol	70.31	92.31
CDX89754	Canola	plastid	71.09	81.25
GSMUA_Achr2P16250_001	Banana	cytosol	75.0	78.37
CDY04444	Canola	mitochondrion	49.61	70.95
CDY31804	Canola	cytosol	98.44	60.43
OQU92817	Sorghum	cytosol	62.89	53.85
KRH70478	Soybean	cytosol	41.02	37.37
KRH01639	Soybean	cytosol	87.89	34.78
CDY03437	Canola	cytosol	35.55	34.47
TraesCS6A01G342400.1	Wheat	cytosol	60.94	31.77
Zm00001d007706_P001	Maize	cytosol	39.45	29.79
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	18.36	22.49
CDY32364	Canola	cytosol	25.0	22.07
CDY32367	Canola	cytosol, mitochondrion, plastid	25.0	21.84
HORVU6Hr1G082550.1	Barley	cytosol	31.64	20.61
CDY12232	Canola	cytosol	27.73	12.61
CDY70083	Canola	cytosol	27.73	12.59
CDX76065	Canola	cytosol	33.98	10.69
CDY49794	Canola	cytosol	30.47	10.25
CDY24089	Canola	endoplasmic reticulum, extracellular	33.98	10.14
CDX97975	Canola	cytosol	30.08	10.12
CDY67465	Canola	cytosol	10.94	10.04
CDY43337	Canola	cytosol	33.59	9.67
CDY45119	Canola	extracellular	33.98	9.1
CDY60712	Canola	endoplasmic reticulum	24.61	7.25
CDX90500	Canola	endoplasmic reticulum	24.61	7.25
CDY32270	Canola	cytosol, mitochondrion, plastid	21.88	7.11
CDY40516	Canola	cytosol	21.88	6.71

Protein Annotations

EnsemblPlants:CDY53148	EnsemblPlantsGene:GSBRNA2T00008683001	Gene3D:3.30.420.40	GO:A0A078IW23	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323
PFAM:PF00012	PRINTS:PR00301	ProteinID:CDY53148	ProteinID:CDY53148.1	ScanProsite:PS00297	ScanProsite:PS00329
SEG:seg	SUPFAM:SSF53067	UniParc:UPI0004EE3925	UniProt:A0A078IW23	MapMan:35.1	:

Description

BnaAnng12070DBnaAnng12070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW23]

Coordinates

chrLK033170:-:50243..51281

Molecular Weight (calculated)

28115.3 Da

IEP (calculated)

5.189

GRAVY (calculated)

-0.291

Length

256 amino acids

Sequence
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDSSVQSDM KLWPFKIIPG
101: PADKPMIVVS YKGEEKQFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNATSVGEKN VLIFDLGGGT FDVSLLTIEE
201: GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIS ESKEDSFFHC ADHHRD

Best Arabidopsis Sequence Match ( AT1G56410.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPVNTV FDAKRLIGRR FSDASVQSDM KFWPFKVTPG
101: QADKPMIFVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG SSIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVLRIINEP TAAAIAYGLD KKATSVGIKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GDARALRRLR TACERAKRTL SSTAQTTVEV DSLFEGIDFY
301: SPITRAKFEE MNMDLFRKCM EPVMKCLRDS KMDKSMVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGIE TIGGVMTTLI QRNTTIPAKK EQEFTTTVDN QPDVLIQVYE GERARTIDNN ILGQFVLSGI PPAPRGIPQF TVCFDIDSNG ILNVSAEDKA
501: TGKKNKITIT NDKGRLSKDD IEKMVQEAEK YKSEDEEHKK KVEAKNGLEN YAYNVGNTLR DMGEKLPAAD KKKFEDSIEE VIQWLDDNQL AEADEFEHKM
601: KELESVWSTI ITKMYQG

Arabidopsis Description

HSP70-18Heat shock 70 kDa protein 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.