CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53148	Canola	cytosol	60.43	98.44
CDY02235	Canola	cytosol	43.41	97.84
CDY16175	Canola	cytosol	59.71	96.89
CDX85038	Canola	cytosol	59.71	94.68
CDY40361	Canola	cytosol	54.44	94.58
CDY15421	Canola	cytosol	54.2	94.17
CDY10445	Canola	cytosol	54.2	94.17
CDY16796	Canola	cytosol	53.24	93.28
CDY36723	Canola	cytosol	42.93	91.79
CDX89754	Canola	plastid	43.41	80.8
GSMUA_Achr2P16250_001	Banana	cytosol	47.0	80.0
CDY04444	Canola	mitochondrion	31.65	73.74
KRH70478	Soybean	cytosol	43.17	64.06
OQU92817	Sorghum	cytosol	39.81	55.52
KRH01639	Soybean	cytosol	84.65	54.56
CDY03437	Canola	cytosol	33.81	53.41
Zm00001d007706_P001	Maize	cytosol	41.97	51.62
TraesCS6A01G342400.1	Wheat	cytosol	57.55	48.88
HORVU6Hr1G082550.1	Barley	cytosol	37.65	39.95
Os12t0569700-03	Rice	endoplasmic reticulum, mitochondrion	19.66	39.23
CDY32364	Canola	cytosol	17.51	25.17
CDY32367	Canola	cytosol, mitochondrion, plastid	17.51	24.91
CDY12232	Canola	cytosol	29.98	22.2
CDY70083	Canola	cytosol	29.98	22.16
CDY67465	Canola	cytosol	11.75	17.56
CDY49794	Canola	cytosol	27.58	15.11
CDX97975	Canola	cytosol	27.34	14.98
CDX76065	Canola	cytosol	28.54	14.62
CDY24089	Canola	endoplasmic reticulum, extracellular	28.54	13.87
CDY43337	Canola	cytosol	28.3	13.27
CDY45119	Canola	extracellular	28.54	12.45
CDY32270	Canola	cytosol, mitochondrion, plastid	23.26	12.31
CDY60712	Canola	endoplasmic reticulum	24.7	11.85
CDX90500	Canola	endoplasmic reticulum	24.7	11.85
CDY40516	Canola	cytosol	23.02	11.5

Protein Annotations

Gene3D:2.60.34.10	Gene3D:3.30.30.30	Gene3D:3.30.420.40	MapMan:35.1	GO:A0A078H310	UniProt:A0A078H310
EnsemblPlants:CDY31804	ProteinID:CDY31804	ProteinID:CDY31804.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00050483001	InterPro:HSP70_peptide-bd_sf	InterPro:Heat_shock_70_CS	InterPro:Hsp_70_fam	InterPro:IPR029047
PFAM:PF00012	PRINTS:PR00301	ScanProsite:PS00297	ScanProsite:PS00329	PANTHER:PTHR19375	PANTHER:PTHR19375:SF323
SUPFAM:SSF100920	SUPFAM:SSF53067	UniParc:UPI0004EDDEDA	SEG:seg	:	:

Description

BnaC01g27600DBnaC01g27600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H310]

Coordinates

chrLK032279:-:425353..427397

Molecular Weight (calculated)

46295.9 Da

IEP (calculated)

5.679

GRAVY (calculated)

-0.461

Length

417 amino acids

Sequence
(BLAST)

001: MSGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FSDSSVQSDM KLWPFKIIPG
101: PADKPMIVVN YKGEEKQFAA EEISSMVLIK MREIAEAYLG VTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNATSVGEKN VLIFDLGGGT FDVSLLTIEE
201: GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKSKKDIS ESKEDSFFHR SDHHREIDFY SALTRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSTVHDV
301: VLVGGSTQLC KSINPDEAKV QDLLLLDVTP LSLGLETAGG VMTTLIQRNT IIPTKKEQVY EGERARTKDN NLLGKFELSG IPPAPRGQDH WPKEQDHDHQ
401: QQGSLVKGRD REDGARS

Best Arabidopsis Sequence Match ( AT3G09440.1 )
(BLAST)

001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPINTV FDAKRLIGRR FTDSSVQSDI KLWPFTLKSG
101: PAEKPMIVVN YKGEDKEFSA EEISSMILIK MREIAEAYLG TTIKNAVVTV PAYFNDSQRQ ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKATSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFDGIDFY
301: APITRARFEE LNIDLFRKCM EPVEKCLRDA KMDKNSIDDV VLVGGSTRIP KVQQLLVDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI QRNTTIPTKK EQVFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKDE IEKMVQEAEK YKSEDEEHKK KVDAKNALEN YAYNMRNTIR DEKIGEKLAG DDKKKIEDSI EAAIEWLEAN QLAECDEFED
601: KMKELESICN PIIAKMYQGG EAGGPAAGGM DEDVPPSAGG AGPKIEEVD

Arabidopsis Description

HSP70-3Heat shock protein 70 (Hsp 70) family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VI76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.